Lactobacillus helsingborgensis: DLD54_05770
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Entry
DLD54_05770 CDS
T06906
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lhs
Lactobacillus helsingborgensis
Pathway
lhs03030
DNA replication
lhs03410
Base excision repair
lhs03420
Nucleotide excision repair
lhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLD54_05770
03410 Base excision repair
DLD54_05770
03420 Nucleotide excision repair
DLD54_05770
03440 Homologous recombination
DLD54_05770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhs03032
]
DLD54_05770
03400 DNA repair and recombination proteins [BR:
lhs03400
]
DLD54_05770
Enzymes [BR:
lhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLD54_05770
DNA replication proteins [BR:
lhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DLD54_05770
DNA repair and recombination proteins [BR:
lhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DLD54_05770
NER (nucleotide excision repair)
GGR (global genome repair) factors
DLD54_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Polysacc_deac_2
DUF61
DUF2642
Motif
Other DBs
NCBI-ProteinID:
AWN33703
LinkDB
All DBs
Position
complement(1216702..1219377)
Genome browser
AA seq
891 aa
AA seq
DB search
MADKKLLLIDGNSVAFRAFYALFRQLENFRNPEGLHTNAIYTFKNMLDVVLNDVKPDHVL
VAFDAGKTTFRNNMYADYKGGRQKTPSELSEQLPYIQELLHDLGISTYELDNYEADDIIG
TFATIGEKEGFKVTVVTGDKDLTQLASPQTTVMVTKSGVLNLEAYTPEHMKEVNGVTPTE
FIDMKALMGDNSDNYPGVTKIGPKKASQLIQEYGSVENLYDHIDDMKPSKMKENLINDKD
KALLGKKLATIDRHTPLTIGIDDIKWRDVDYQKLRRFYEKMNFRKFLSQLDPESAAGQKD
QPVKDNKAVAFTELKENDINNFAVKEGQTITFYLGMLGANYHLADFVGFAIKIDKQIYVS
RNVDLLKEPQLKNILENKQITKNVFDLKRTTVGLNRLGIHARGIDYDMLLASYLINNENN
SDDMGEICRMYGDNSVKSDYDVYGKGKSAHIPEDDQVLFNHLAGKIEAIENLKETLLAKL
KEHEQDDLFANIEIPVARVLSVMEINGIKVQAETLTQLQDEFAVELKKMEKQIYDEAGEE
FNINSPKQLGHILFEKMGLKPIKKTKTGYSTSVDVLNQLKDESPIIGQILTYRQIAKIQS
TYVNGLLDVIQKDGRVHTRYMQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPD
GYIFSCDYSQIELRVLAQVSGDEQMQEAFRTGYDIHAHTAMKIFHLKSTADVTPLMRRRA
KAVNFGIVYGISDYGLSKNLNISRKQAKQFIDNYFEQYPQIKDYMNKAVQVAREKGYAET
IMHRRRYLPDIHAKNFNVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDDMHLKTKMV
VQVHDELIFDVPKDELETIKKIVPEVMQSAVRLDIPLVADSGYGHNWFDAK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaaattacttttgattgatggtaattcagttgcctttcgtgctttttat
gcactgttccgtcaacttgaaaattttagaaatcctgaaggattgcataccaatgccatt
tatacgtttaaaaacatgcttgatgtcgtcttaaatgatgtcaaacctgaccatgtttta
gtcgcatttgatgcgggtaaaactacttttaggaataatatgtatgccgattataaaggc
ggtagacagaaaacaccgtctgaattgtctgaacagttaccatacattcaagaactttta
catgatctgggcatatccacctatgaactcgacaattatgaggccgatgatattatcggt
acttttgctacaattggtgaaaaagagggtttcaaagtgacagttgttacaggcgacaag
gatttaacgcaactagcttcacctcaaacaacagtaatggtcactaaatccggcgtattg
aacttggaagcttatacgcctgaacacatgaaggaagttaatggtgttacaccaactgaa
tttattgatatgaaagccttaatgggtgataattctgacaattatcctggtgtgactaag
attggtccaaaaaaggcttcacaacttatccaagaatatggttctgtagaaaacctttat
gatcatatagatgatatgaaaccttcaaaaatgaaagagaatctcatcaatgacaaagat
aaggctcttttaggcaaaaaattggcaactattgatcgccacactcctttgactattggg
attgatgatattaagtggcgcgatgtggactatcaaaaattgcgcagattctatgaaaaa
atgaactttcgcaagtttttaagccagttagaccctgaaagtgctgctgggcaaaaggat
caaccagtaaaagataataaagcagttgcttttacagagcttaaagaaaatgacattaac
aactttgcagttaaagaaggtcaaactattactttttatttaggaatgctgggcgcgaac
taccacttagctgattttgttggttttgccattaagatcgataagcaaatatatgtaagc
cgtaatgttgacctgttaaaagagccgcaacttaagaatattctggaaaataagcaaatt
actaaaaatgtttttgacttaaagcggacaacagttggcttaaatcgtttaggtattcat
gctcgcggcattgactatgacatgcttcttgcttcgtatttgattaataatgaaaataat
tcggatgatatgggcgagatatgtcggatgtacggtgataattcggttaaaagtgattac
gacgtttatggtaaaggtaaaagtgcccacattccagaagacgatcaggtgttatttaat
catttggctggcaagatagaagcaatcgagaacttaaaagagacattgttagctaaacta
aaagaacacgagcaagacgatctttttgccaatattgaaatccctgttgccagagttctg
tctgttatggaaatcaatggcatcaaagttcaagctgagactttaacgcagcttcaagat
gagtttgcagttgagctaaaaaaaatggaaaagcaaatttatgatgaagctggtgaagaa
tttaatattaattctcctaagcaattaggtcatattttgtttgaaaaaatgggcttaaag
ccaattaaaaagaccaaaaccggttattccacatcagttgatgtcttaaatcagctaaaa
gatgaaagtcccattattggacaaattctcacttaccggcaaattgctaaaatccagtca
acttatgttaatggtttactggatgtcattcaaaaagacggtcgggttcataccagatac
atgcaaactcttactgctaccggtcgtttgtcctcagttgatcctaatttacaaaatatt
ccaaccagaaccgaggaaggtaagcaaattagaaaagcgtttgttcctagtgaacctgat
ggctacattttctcctgtgattattcacaaattgaattgcgtgttttggcacaagtttct
ggcgatgaacagatgcaggaagcttttagaaccggttacgatattcacgctcataccgca
atgaaaatttttcacttaaaatcaacagccgatgtcactcctttaatgcgccgcagggcc
aaagctgtgaatttcggtattgtttacggcatttctgattacggtttatctaaaaacctt
aatattagtcgcaagcaggccaagcaattcatagataattattttgagcaatatcctcaa
attaaagattacatgaataaagcagtccaggtagcccgtgaaaaaggatatgccgaaaca
attatgcacagaagacgttacttgccagatattcatgctaaaaactttaatgtgcgttca
tttgctgagagaacagcaattaattcgccaattcaaggttctgccgcggatattatcaag
atagcgatgattaacatgcagaaaaaattagatgacatgcatcttaagaccaagatggta
gtccaggttcatgatgagctgatttttgatgtgccaaaggatgaattggaaacaattaaa
aagatcgtaccggaagttatgcagtcggctgtaagactagacatacctcttgtagctgat
tccggatatggtcataattggtttgatgctaagtaa
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