Lactobacillus helsingborgensis: DLD54_05820
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Entry
DLD54_05820 CDS
T06906
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lhs
Lactobacillus helsingborgensis
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhs03019
]
DLD54_05820
Messenger RNA biogenesis [BR:
lhs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DLD54_05820
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
MIB_HERC2
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AWN33713
LinkDB
All DBs
Position
complement(1226638..1227615)
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AA seq
325 aa
AA seq
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MYKRLLDYNDGEELELVVLIKNSQLRHTKKGKLYLAMSFGDSSGEIRGNFWDANDQDAAT
FNAGTIVELNGKREEYQGQPQIKIYSLRVVGPEEGYDLRQFIKSAPEKIADMKEEINQYV
FEILNPTWNRIVRFLLKKWEKRFFEFPAGKSNHHAVRGGLAYHTVSMLRDAKGLATNYPQ
INCSLLYAGCILHDMGKVLELTGPAATQYTTEGNLIGHLVLIDEQIMLAAQQLKIDLESE
DLLLLRHMVLSHHGKFEYGSPKLPALLEAELLHRIDDLDASIYAITNALQHTRPGNFTDN
IMSQGGRKFYRPKTDESLGKARKLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtataaacgtttgctggattacaatgacggcgaggaattggaactagtggtgttaatc
aaaaattcacaattaagacataccaagaaaggcaaactatatttagcaatgtcctttggt
gactcgtcgggtgaaattcgcggtaatttttgggatgctaatgatcaagatgctgcaact
ttcaatgccggtacaattgtcgagttgaatggtaagcgtgaagaatatcaaggccaaccg
caaattaaaatctacagtctccgtgtcgtgggaccagaagaaggctatgatctgcgccaa
tttataaagtctgctcctgaaaaaatcgcggatatgaaagaagaaataaatcaatacgtt
tttgagatattaaatccgacgtggaataggattgtgcggtttttgttaaaaaaatgggag
aaacgtttcttcgaatttcctgctggcaaaagtaatcatcatgccgtacgtggcggtttg
gcataccatacggtatctatgttgcgtgatgccaagggcttagccactaattacccgcaa
attaattgttccttactttatgctggttgcattctacatgatatgggcaaagtgttggaa
ctaactggacctgctgccactcagtatacgactgagggcaatttaattgggcacttggtt
ttaattgatgagcaaattatgttagcggcacaacaacttaagattgaccttgaatctgaa
gatttgctgcttttacggcacatggttttatctcatcacggcaagtttgaatatggttcg
cctaaattaccagcgttgcttgaagcggaattattacatcgtattgatgatttagatgcg
tcaatttatgcgatcactaacgccttacaacatactcgtccaggtaattttacggataat
atcatgagtcaaggagggcgtaagttttatcgtcctaagaccgatgagtctttaggtaaa
gcgcgcaagttagagtaa
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