Leptopilina heterotoma: 122497591
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Entry
122497591 CDS
T08438
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122497591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122497591
Spliceosome [BR:
lht03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122497591
Complex C
U5 SnRNP specific factors
122497591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_16
Suf
HAT_PRP39_C
TPR_2
HAT_Syf1_CNRKL1_C
TPR_15
ARM_TT21_2nd
TPR_1
TPR_11
TPR_12
ARM_TT21_N
TPR_CcmH_CycH
ChAPs
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
122497591
NCBI-ProteinID:
XP_043460749
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MAVPSSSLSRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPTK
RAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRKE
YREKRLREELERYRQERPKIQQQFSDLKRDLVSVSEDEWKNIPEVGDARNRKQRNPRAEK
FTPLPDSVLARNLGGETTSSIDPTSGLASMMPGVTTPGMLTPTGDLDLRKIGQARNTLMD
VKLSQVSDSVAGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPADTAKAVIAQSVRHIPTS
VRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCST
SVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIERAIS
SLSANGVEINREHWFKEAMEAEKAGAVHCCQVIIKSVIGGGVEEEDRKHTWMEDAETCAQ
QGALECARAVYAFALSTFPSKKSIWMRAAFFEKTYGTRESLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASA
PTPRVMMKSAKLEWALNNLDTALKLLKEALEMFDDFPKLWLMKGQIEEQQNMNEQALTTY
NQGIKKCPNSIPLWRLLTHLECHSGRVTKARSVLEKARLRNPKNDELWLEAVRIENQNSA
TQNMAHTLMAKALQECPNSGLLWAEAIFMEPRPQRKMKSVDALKKCEHDAHVLLTVSKLF
WSESKVSKCRDWFNRTVKLRPVLGDAWAYFYKFEKLHGTDEQQEDVKKRCIASEPKYGEN
WCKVSKNINNWCFNTEQILILVAKELPIPI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccatcatcatctttgtcgagaaataaaaaacattttctcggtgttcctgca
cctttaggatatgtcgccggtgttggaagaggagctactggattcaccactcgttcggat
attggaccagctcgtgatgcaaatgatgtttcagatgacagacatgcaccgccgactaaa
cgggcgaaaaagaaggaagaagaagaggaggacgaggaagatttaaacgattctaattat
gacgaattttccggttacggtggttccttatttagcaaggatccatacgataaggacgat
gaggaagccgatgcaatatatgaagcaatcgataaaagaatggacgagaaacgtaaagaa
tatcgtgagaaacgtttaagagaagaattggaacgttatcgtcaggagagaccgaaaata
caacagcaattttctgatttaaaacgtgatcttgtcagtgtatcggaggatgaatggaaa
aatattcccgaagttggtgacgcgagaaatcgtaaacaacgaaatccacgtgcggagaaa
tttacaccattaccagattctgttttagcgagaaatttaggcggtgaaacaacgtcgagc
attgatccaacgagtggtttggcatcaatgatgcccggtgtcacgacacccggtatgtta
acaccaactggtgatcttgatttacgaaaaattggtcaagcgagaaatacacttatggac
gtgaaattgagtcaagtctcggattcagtcgccggacaaactgttgtcgatccaaagggg
tatctcaccgatttacagagtatgattccgacatatggaggagatatcaatgacataaag
aaggcgagacttcttttgaaatcggttcgcgagacaaatccgaatcatccaccggcttgg
attgcttctgctcgtttagaagaggtcacaggtaaagttcaagcagcgcgcaatttaata
atgaaaggctgtgaagtgaatccaacatcggaagatttatggcttgaggcggcgcgctta
caaccggcggacacggcaaaagcggtgattgcccagtcggttcgtcatataccaacgtca
gtgagaatatggataaaggccgctgacctggagacggaaacaaaggcgaaacgacgtgtt
tatcgaaaagcacttgagcacattccaaattccgtgcgattatggaaggcggctgtggaa
ttagaggagccggaggatgcgagaattttattgagtcgagcggttgaatgttgctcgaca
agtgttgatctatggctcgcgttggctcgtttagagacttatgataatgcacgtaaagtg
ttgaataaagcgcgagagaatattccgactgatcggcaaatttggacgactgccgctaaa
ctcgaggaggcgaatggcaataagcacatggttgagaaaatcattgagcgcgctatttct
tctctaagtgcaaatggagtggaaattaatagggagcattggtttaaagaggctatggag
gcggaaaaagccggtgcggttcattgttgtcaggtgattatcaagtctgtgattggcggt
ggagtcgaggaagaggatcgaaagcatacctggatggaggatgcagagacgtgcgctcaa
caaggagcgttagaatgcgctcgagctgtttatgcatttgccttgagcactttcccaagt
aaaaagtccatttggatgagagctgccttttttgagaagacctacggtacaagagaatct
ctcgaagctctattgcaacgagccgttgctcattgtccaaaaagcgaagttctttggctt
atgggcgcaaaatcaaagtggttggctggcgatgttccggcagcaagaggtattctttca
ctggctttccaggcaaatccaaattcagaagagatttggttggctgcggtgaaattggaa
tcagaaaattcagaatacgagagagcaagacgtttattggcgaaggcacgcgcctccgct
ccaacgccacgtgttatgatgaaaagtgcaaaactcgaatgggcgctaaataatttggat
actgctctgaaattattgaaagaagccctcgaaatgtttgatgatttccctaaattgtgg
ttaatgaaaggacaaattgaggaacaacaaaatatgaatgaacaagctcttaccacttac
aatcaggggataaagaagtgtccgaattcgattccattgtggcggcttttgacgcattta
gaatgccactcgggacgtgtaacgaaagcgcgttctgttttggaaaaagcgcgtctgaga
aatccaaagaacgatgaattatggcttgaggcggttagaattgaaaatcaaaattcagca
acgcaaaatatggctcatacattgatggcaaaggcattgcaggaatgtccgaattcggga
ttattgtgggcagaagctatttttatggaaccaaggccacaacgaaaaatgaagagtgtc
gatgctttaaaaaaatgcgaacacgatgcacatgttcttctcactgtctccaaattattt
tggagcgagagtaaagtttcaaagtgtcgagattggtttaatcgaacagtaaaattgaga
cctgtattaggcgatgcctgggcgtatttttataaatttgaaaaacttcatggaactgat
gaacaacaggaggatgtgaagaaacgttgcattgcctccgaaccaaagtatggagaaaat
tggtgtaaagtttcgaaaaatatcaacaattggtgtttcaatacggaacaaattttaatt
ctcgtcgctaaggagcttccaattcctatatga
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