KEGG   Leptopilina heterotoma: 122497591
Entry
122497591         CDS       T08438                                 
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
lht  Leptopilina heterotoma
Pathway
lht03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lht00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122497591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lht03041]
    122497591
Spliceosome [BR:lht03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    122497591
 Complex C
   U5 SnRNP specific factors
    122497591
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N HAT_Syf1_CNRKL1_N TPR_16 Suf HAT_PRP39_C TPR_2 HAT_Syf1_CNRKL1_C TPR_15 ARM_TT21_2nd TPR_1 TPR_11 TPR_12 ARM_TT21_N TPR_CcmH_CycH ChAPs Ribosomal_60s
Other DBs
NCBI-GeneID: 122497591
NCBI-ProteinID: XP_043460749
LinkDB
Position
Unknown
AA seq 930 aa
MAVPSSSLSRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPTK
RAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRKE
YREKRLREELERYRQERPKIQQQFSDLKRDLVSVSEDEWKNIPEVGDARNRKQRNPRAEK
FTPLPDSVLARNLGGETTSSIDPTSGLASMMPGVTTPGMLTPTGDLDLRKIGQARNTLMD
VKLSQVSDSVAGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPADTAKAVIAQSVRHIPTS
VRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCST
SVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIERAIS
SLSANGVEINREHWFKEAMEAEKAGAVHCCQVIIKSVIGGGVEEEDRKHTWMEDAETCAQ
QGALECARAVYAFALSTFPSKKSIWMRAAFFEKTYGTRESLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASA
PTPRVMMKSAKLEWALNNLDTALKLLKEALEMFDDFPKLWLMKGQIEEQQNMNEQALTTY
NQGIKKCPNSIPLWRLLTHLECHSGRVTKARSVLEKARLRNPKNDELWLEAVRIENQNSA
TQNMAHTLMAKALQECPNSGLLWAEAIFMEPRPQRKMKSVDALKKCEHDAHVLLTVSKLF
WSESKVSKCRDWFNRTVKLRPVLGDAWAYFYKFEKLHGTDEQQEDVKKRCIASEPKYGEN
WCKVSKNINNWCFNTEQILILVAKELPIPI
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggcagttccatcatcatctttgtcgagaaataaaaaacattttctcggtgttcctgca
cctttaggatatgtcgccggtgttggaagaggagctactggattcaccactcgttcggat
attggaccagctcgtgatgcaaatgatgtttcagatgacagacatgcaccgccgactaaa
cgggcgaaaaagaaggaagaagaagaggaggacgaggaagatttaaacgattctaattat
gacgaattttccggttacggtggttccttatttagcaaggatccatacgataaggacgat
gaggaagccgatgcaatatatgaagcaatcgataaaagaatggacgagaaacgtaaagaa
tatcgtgagaaacgtttaagagaagaattggaacgttatcgtcaggagagaccgaaaata
caacagcaattttctgatttaaaacgtgatcttgtcagtgtatcggaggatgaatggaaa
aatattcccgaagttggtgacgcgagaaatcgtaaacaacgaaatccacgtgcggagaaa
tttacaccattaccagattctgttttagcgagaaatttaggcggtgaaacaacgtcgagc
attgatccaacgagtggtttggcatcaatgatgcccggtgtcacgacacccggtatgtta
acaccaactggtgatcttgatttacgaaaaattggtcaagcgagaaatacacttatggac
gtgaaattgagtcaagtctcggattcagtcgccggacaaactgttgtcgatccaaagggg
tatctcaccgatttacagagtatgattccgacatatggaggagatatcaatgacataaag
aaggcgagacttcttttgaaatcggttcgcgagacaaatccgaatcatccaccggcttgg
attgcttctgctcgtttagaagaggtcacaggtaaagttcaagcagcgcgcaatttaata
atgaaaggctgtgaagtgaatccaacatcggaagatttatggcttgaggcggcgcgctta
caaccggcggacacggcaaaagcggtgattgcccagtcggttcgtcatataccaacgtca
gtgagaatatggataaaggccgctgacctggagacggaaacaaaggcgaaacgacgtgtt
tatcgaaaagcacttgagcacattccaaattccgtgcgattatggaaggcggctgtggaa
ttagaggagccggaggatgcgagaattttattgagtcgagcggttgaatgttgctcgaca
agtgttgatctatggctcgcgttggctcgtttagagacttatgataatgcacgtaaagtg
ttgaataaagcgcgagagaatattccgactgatcggcaaatttggacgactgccgctaaa
ctcgaggaggcgaatggcaataagcacatggttgagaaaatcattgagcgcgctatttct
tctctaagtgcaaatggagtggaaattaatagggagcattggtttaaagaggctatggag
gcggaaaaagccggtgcggttcattgttgtcaggtgattatcaagtctgtgattggcggt
ggagtcgaggaagaggatcgaaagcatacctggatggaggatgcagagacgtgcgctcaa
caaggagcgttagaatgcgctcgagctgtttatgcatttgccttgagcactttcccaagt
aaaaagtccatttggatgagagctgccttttttgagaagacctacggtacaagagaatct
ctcgaagctctattgcaacgagccgttgctcattgtccaaaaagcgaagttctttggctt
atgggcgcaaaatcaaagtggttggctggcgatgttccggcagcaagaggtattctttca
ctggctttccaggcaaatccaaattcagaagagatttggttggctgcggtgaaattggaa
tcagaaaattcagaatacgagagagcaagacgtttattggcgaaggcacgcgcctccgct
ccaacgccacgtgttatgatgaaaagtgcaaaactcgaatgggcgctaaataatttggat
actgctctgaaattattgaaagaagccctcgaaatgtttgatgatttccctaaattgtgg
ttaatgaaaggacaaattgaggaacaacaaaatatgaatgaacaagctcttaccacttac
aatcaggggataaagaagtgtccgaattcgattccattgtggcggcttttgacgcattta
gaatgccactcgggacgtgtaacgaaagcgcgttctgttttggaaaaagcgcgtctgaga
aatccaaagaacgatgaattatggcttgaggcggttagaattgaaaatcaaaattcagca
acgcaaaatatggctcatacattgatggcaaaggcattgcaggaatgtccgaattcggga
ttattgtgggcagaagctatttttatggaaccaaggccacaacgaaaaatgaagagtgtc
gatgctttaaaaaaatgcgaacacgatgcacatgttcttctcactgtctccaaattattt
tggagcgagagtaaagtttcaaagtgtcgagattggtttaatcgaacagtaaaattgaga
cctgtattaggcgatgcctgggcgtatttttataaatttgaaaaacttcatggaactgat
gaacaacaggaggatgtgaagaaacgttgcattgcctccgaaccaaagtatggagaaaat
tggtgtaaagtttcgaaaaatatcaacaattggtgtttcaatacggaacaaattttaatt
ctcgtcgctaaggagcttccaattcctatatga

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