Leptopilina heterotoma: 122499344
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Entry
122499344 CDS
T08438
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122499344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122499344
03041 Spliceosome [BR:
lht03041
]
122499344
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122499344
Spliceosome [BR:
lht03041
]
Complex B
Other components
Prp19-related factors
122499344
Complex C
122499344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_10
TPR_15
DHR-2_Lobe_A
ARM_TT21_C
NRDE-2
PPR
TPR_7
HTH_psq
DUF412
Motif
Other DBs
NCBI-GeneID:
122499344
NCBI-ProteinID:
XP_043463575
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MAESSENSLALLQNEEDLPYEEEILRNPYSVKHWQRYIDHLKATKSANLNIVYERALKEL
PGSYKLWNNYLRLRLKKLKDQVKGNIQHPLYEDVANAFERALVWMHKMPRIWINYCIFMT
DQGFITQTRHVFDKALRALPITQHHRIWPLYLNFVKMHNIPETAVRVFRRYLKMAPEDTE
DYIEYLISIDRLDESATQLAHIVNQDDFVSKHGKSKHQLWSELCDLISKHPTQIKTLNVD
AIIRGGLRRYTDSLGSLWNSLADYYIRSGLFERARDIYEEAIQTVKTVRDFTQVFDAYAQ
FEELSYKKVLEENVTSPNLSEEDEIEEELRLARYENLLERRLLLLNSVMLRQNPHNVQEW
HKRVTLYEGEPHEIINTYTEAVSTVQPELAVGKLHTLWVEFAKFYENNSQIPDARVVFEK
ATLVQYLKVDDLASVWCEWAEMEIRHNNITEALRLMQRATAMPTRKVAYHDENESVQMRL
YKSLKVWSMYADLEESFGTFKMCKAVYDKIIDLKIATPQIIINYGVFLEENNYFEEAFRA
YEKGIALFKWPNVYDIWNTYLQKFKKRYEGTKLERMRDLFEQCLEHCPPKYAKNLYLLYA
KLEEDYGLARHAMSVYERATDAVLPEEKFEMFNVYIQKAANIYGVPQTRTIYEKAIEVLT
EENAREMCLRFAEMETKLGEVDRSRAIYAFCSQMCDPRTTSNFWQVWKEFEVRHGNEDTM
REMLRIKRSVQAKYNTNVNMMAAQMQNSATSQITEPMDAMRLLDSKVSEMPPPPAPKNTI
KFIRGETEGGKTAEPQVTNPDEIDIDMDMDNDDDDNDDNDDEVDENGQETEDIPIEKQII
PSQVFGSLRKKDDDDDSS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctagtgaaaattccttagcacttttacaaaatgaagaagatttaccctac
gaagaggaaatattacgaaatccttattcagtgaaacattggcaaagatatattgatcat
ctgaaagcaacaaagagtgccaatttgaatattgtttacgaacgtgccctcaaagaattg
ccaggaagttataaactgtggaacaattatcttcgactacgattgaaaaaattgaaggat
caagtcaaaggaaacatacaacatccactttacgaagatgtggccaatgctttcgaacgt
gcattagtttggatgcataaaatgcctcggatatggataaactattgtatctttatgaca
gatcagggttttataacgcaaacacgtcatgtttttgacaaagctctccgggcattgcca
atcactcaacatcatcgaatttggccactttacctaaattttgtcaaaatgcataatatt
cccgagactgccgttagagttttcagaagatatctcaagatggcaccagaggacacggaa
gattacatagagtatctgatatcaatagatcgtttagatgaatctgcaactcaacttgcg
catattgttaatcaagatgactttgtttcaaagcacggaaaatccaagcatcaattatgg
tccgaattatgtgatttaatatcgaaacacccgacacaaataaaaacacttaatgtcgat
gcaattataagaggtggtcttcgacgttatactgattcattgggttcgttgtggaattcc
ctagccgattattacattcgcagtggacttttcgagagggccagagatatctacgaggaa
gctatacaaactgtcaagactgtaagagattttacccaagtattcgatgcatacgcacaa
tttgaagaattgagttacaagaaagttttagaagaaaatgtaaccagtccaaatctttct
gaagaagatgaaatagaagaagaattgaggcttgctcgatatgaaaatctcctcgagaga
cgtttattattacttaattctgtaatgttaagacaaaatcctcacaatgttcaagaatgg
cataaacgagttacgctttacgaaggagaaccgcacgagattatcaatacgtacacagag
gcagtgagtacagtccagccagaattagccgttggaaaattgcacacactatgggtggaa
tttgccaagttttatgagaataattcccaaataccggatgcgagagttgtatttgaaaaa
gcaactctcgttcaatatttaaaagtagacgatctcgcttcagtttggtgtgaatgggca
gaaatggaaattagacacaataatataacagaggccttaagactcatgcaacgtgcgact
gcaatgccaacacggaaagttgcctatcacgacgaaaatgaatcggttcaaatgagattg
tataaatctttaaaagtttggtcaatgtacgcggatttggaggagagctttggaacattt
aaaatgtgtaaagcggtttatgacaaaataatcgacctaaaaattgcaacacctcaaatt
attataaactatggagtatttctagaagaaaacaattacttcgaagaagctttcagagct
tacgaaaaaggaattgctctcttcaaatggccgaatgtttacgacatatggaacacctat
ctgcaaaagtttaaaaaacgttacgagggaacaaaattggaacgtatgcgagatttattt
gaacaatgtctcgaacactgtcctccgaaatacgccaaaaatttatatttattgtacgca
aaattggaggaggattatggtctcgcaagacacgcaatgtcagtctatgaacgtgccaca
gatgctgttttacctgaagaaaaattcgagatgtttaacgtctacatccagaaagcggca
aatatttatggtgttccgcaaacaaggacaatttacgagaaagctatcgaagttcttacc
gaagaaaatgcgagggagatgtgtctgcgttttgcggaaatggaaactaaattaggagaa
gtcgatcgttcgagagcaatttatgcattttgctcgcaaatgtgcgatcctcggaccaca
tcaaacttttggcaagtttggaaagaattcgaggttcgccatggaaatgaggacacaatg
cgtgaaatgttgagaataaaacgtagcgttcaagctaaatacaatacgaacgtgaatatg
atggctgcacaaatgcaaaatagtgccacaagccaaattactgaacctatggatgcaatg
cgattactggacagcaaagtatctgaaatgcctcctccaccagcaccgaagaatacgatt
aaatttatacgcggtgaaacggaaggtggaaaaacagcagaaccacaagtcactaatcct
gacgaaattgatatcgatatggatatggataacgatgacgacgataatgacgacaatgat
gacgaggtcgatgaaaatggacaagaaactgaagatattccaatagaaaaacagattata
ccatctcaagtgtttggtagtctacgaaaaaaagacgacgatgatgatagctcgtga
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