Leptopilina heterotoma: 122499638
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Entry
122499638 CDS
T08438
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122499638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122499638
03009 Ribosome biogenesis [BR:
lht03009
]
122499638
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122499638
Spliceosome [BR:
lht03041
]
Complex A
U1 snRNP components
U1 related factors
122499638
Complex B
122499638
Ribosome biogenesis [BR:
lht03009
]
Eukaryotic type
Pre-60S particles
Helicases
122499638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122499638
NCBI-ProteinID:
XP_043464024
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MGRYRSRSKDRDRRRRTRSRSRSRSPRDRRNWGGGRDRDRDRGGNSRGGRNQPGANLKKP
KWDLSRLEPFKKDFYIPRDVVQNRDPRIIEQYRSDKEITLRGRSIPNPVFYFEEAGFPEY
VIKEIKKQGFKEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYVLPAIVHINSQPKLSR
KDGPIALVLAPTRELAQQIQQVAEDFGRSSAIRNTCLYGGAPKNAQIRDLEGGVEIVIAT
PGRLLDFLESGKTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK
EVKNLAEDFLKDYAQINVGSLQLAANHNILQIIDVCQDYEKESKLNTLLKEIMAEKENKT
IVFIETKRRVDEITRKMKREGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARG
LDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEAN
QVINPKLLELADGRGGNFIRHRGGKNRWRMKGGRGDRERSYSRSRSRSYSRERNGRSRRS
YSRSYSHSRSPVNRTGKSSDSPRGEGSSIETLPTIPSRPPVIPQLLATLIPNTTHPPPPV
PQTINKPQNIHINTQPPLPPTLSPPPPPPPPADKPTLPPMQQTFCHLPPLPRYSQPAPPF
HQQPPPPSHPPPPPVGLSSSSIQTISHSINILGCAPGPPPLPRVNSMNLGGPYRHLGGGP
PIGGGGYQNALPTSTYYQPPPPPIHPINGIHH
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggacgttatagaagccgcagcaaagacagagatagaagacgtaggacacgcagtcgt
tccaggagtcgttcaccacgagaccgaagaaattggggaggaggtcgtgatcgtgaccgt
gatcgaggaggaaacagtcgagggggacgaaatcaaccaggtgcaaatttaaagaagccc
aagtgggatctgagtcgtcttgaaccatttaagaaagacttttatattccgagggacgtc
gttcagaacagagatcctcgtattattgaacagtacagaagtgataaggaaattactcta
cgtgggcgtagtattcctaatcctgtattctatttcgaggaagcaggatttcctgaatac
gtcatcaaagaaattaaaaagcaagggttcaaagaaccaacttccattcaagctcaagga
tggccgatagctttaagcggaagagatatggtgggaattgcttccacgggatctggcaaa
acattatcatacgtacttcctgcaattgtacatattaatagtcagccgaaactctctcgt
aaggatggacctatagctcttgtcttggcgccaacacgtgaattggctcaacaaattcaa
caagttgcagaagactttggacgatcgtctgcaattagaaacacttgtttgtacggggga
gctccgaaaaatgctcagatccgcgatctagaaggaggcgtagaaatcgtcattgcaact
ccaggtagacttttagattttctcgaatcggggaagacaaatttgaagcggtgcacttat
ttagtcttggacgaagctgaccgaatgttagacatgggtttcgaaccgcaaattaggaaa
ataatagaacaaattaggccggacagacaaactttaatgtggtccgccacttggccgaag
gaagtgaagaatctagctgaggattttctaaaggattatgctcagattaatgttggttct
ttgcagctggcggccaatcataatattttacaaattattgacgtctgtcaggattatgag
aaagaatcaaagctaaatactcttttaaaagaaattatggctgaaaaggaaaataaaacc
atagtatttattgaaacgaaacgtagggttgatgaaattaccagaaaaatgaaacgagag
ggatggcccgctgtttgtatacatggcgataagacacagcaagagagagattgggtttta
caagatttcaggtccggtaaagcaccaattctagtggcaacagatgtcgcagctcgtgga
cttgacgttgaagacgtcaagtttgtaatcaacttcgactatccgtcttgctcagaagat
tatgtgcatcgtattggacgcactggtcgtaggcagaaaacaggaacagcttacactttt
tttacgcccaataattccaataaggcaaacgacctcatacaagtattaaaagaagctaat
caagtgatcaatccaaagcttctggaactcgccgatggtaggggtggcaattttattaga
cacagaggaggtaaaaatcggtggcgaatgaaaggaggccgaggcgacagagagcgcagt
tactcacgaagtcgaagtcgtagctatagtagagaacgaaatggaagaagtcggcgaagt
tacagcagaagttactcccacagtcgcagtcctgttaatcgcacaggcaagtcgtcagac
agtcctcgtggtgaaggctcttcaattgaaaccctccctacaattccaagtcgacctccc
gtaattcctcagttactggcaactctcattcccaacaccactcatcccccacctccagtg
ccacagaccattaataagccccagaatattcacataaacacacagccgccactgccaccg
actctctcccctccgccgccacctcctcctccagccgacaaacccacgctgcctccaatg
cagcagaccttctgccaccttcctcccttgccacgttactcgcagccggctcctcccttc
caccagcagccaccgccaccctcccaccctcctccccctccggtaggcctaagttccagc
tcaatacagacaatctcccattctatcaatattttggggtgtgctccgggccctcctcct
ctaccgagagtgaattcgatgaacttgggtggaccttaccgtcatctcgggggtgggccc
cccataggcgggggtggctaccagaacgcgttgcccacctcgacgtactaccagccgcct
ccgccacccatccaccccatcaatggcattcatcattag
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