Leptopilina heterotoma: 122499640
Help
Entry
122499640 CDS
T08438
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122499640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122499640
03009 Ribosome biogenesis [BR:
lht03009
]
122499640
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122499640
Spliceosome [BR:
lht03041
]
Complex A
U1 snRNP components
U1 related factors
122499640
Complex B
122499640
Ribosome biogenesis [BR:
lht03009
]
Eukaryotic type
Pre-60S particles
Helicases
122499640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
DUF6505
Motif
Other DBs
NCBI-GeneID:
122499640
NCBI-ProteinID:
XP_043464026
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MYSNGYSNQTSFRPRGNREFGNRKGGGTYWNSQQQTQQTDFSSKKSSLKKMPGDLLKKPN
WTLGDLPYINKNLYTPNPNIFKRSLEEVNKYRVEKEITVKGKNIPFPIQAFEESNFPYYV
MDKIIKQGFKEPTAIQAQGWPIAQSGRDMVGIAQTGSGKTLAYILPAIIHIQCQQKLKQG
EGPLVLVLAPTRELAQQIQTVARDFGTSLEIRNTCIFGGSPKGPQARDLERGVEICIATP
GRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE
VQALAEDFLNDYIQVNIGSLMLAANHNIRQIIEICQEHEKEAKLSKLLRELGCERGNKTI
IFVETKKKVDDITKTIKREGWSAIAIHGDKSQPERDYVLSEFRTGKTAILVATDVAARGL
DVEDVKYVVNFDYPNSSEDYIHRIGRTGRCQSAGTAYAFFTPNNARQAKELISVLEEAGQ
TINPQLAEMSNSQRHQYGKGRQRWSNNRNPKDSNSLGSPRNNHSPNTNGWQNQHIIQPSQ
MNGGQERQMMRSQNTYQNNRQGGYQNNYQQQQQQQQQTTVAQTAQQPQQHHHQQQQQQQP
RQSNGYHHSGGYQANGNGIQNTYQATSAPRYQNRVGYQGSRFNNRQSTFNGGQNGQCMYS
MPPPFMMPSAGPTDSSIQSLVNNKFFQPTNRPPPGPNACAYQSMGYGQFQAVPPYGYPYP
PTPVQQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtaacggatattccaatcaaacctctttcagacccagggggaacagagagttt
ggcaaccggaaagggggtggaacttattggaacagccaacaacaaactcaacaaactgat
tttagttcaaagaagtcaagtttaaaaaagatgccaggtgatttgttgaagaaaccaaat
tggactttgggtgatttaccttatattaataaaaatttatacacaccaaatcccaatata
tttaaacgttctctcgaagaagtcaacaaatacagagtagaaaaggaaatcactgttaaa
ggaaaaaatatcccctttccaatacaggcatttgaggaaagcaactttccttattatgtt
atggacaaaatcataaagcagggcttcaaagaaccaaccgctattcaagctcaaggttgg
ccgattgcgcaaagtggaagagacatggttggaattgcacaaaccggatctggtaaaact
ttagcttatatattgccggcaatcatccacattcaatgtcaacaaaaattgaagcaagga
gaaggtccacttgtgttggttcttgcaccaacaagagaattggcacagcaaattcaaaca
gttgcacgcgattttggaacgtcgttggaaatccgcaacacctgtattttcggcggctct
ccgaaaggacctcaagcacgagatttggagcgtggcgttgagatttgcatcgccactcca
ggaagattgatcgactttttagaaaaaggcacgaccaatcttcgaagatgcacatatctc
gtgctcgatgaagccgacagaatgctggacatgggctttgagccccagatcagaaaaatc
attgaacaaatcagaccagaccgacaagtgctcatgtggtctgccacttggccaaaggaa
gtgcaagctcttgccgaagattttcttaatgattacattcaggttaacattggctctctg
atgttggccgcgaatcacaacattcgacaaatcattgaaatttgccaggaacatgagaag
gaagctaaattatcaaagttattgcgggaactgggttgcgaacgcggaaacaagacaatt
atatttgttgaaactaagaagaaggttgatgacatcactaaaaccatcaaacgagaggga
tggtcagcaattgcaattcacggtgataagtcgcaacccgaacgggattacgttctctct
gagtttagaacgggaaaaactgcgattctagtggcaaccgacgtggcagctcgaggtttg
gatgtggaggatgtgaaatacgtcgtgaattttgattatcccaacagttcggaagactac
attcataggataggtagaacaggacgttgtcaaagcgctggtacagcttatgctttcttc
acacccaacaatgctcgtcaagcgaaagaattgatctccgttcttgaagaagctggtcaa
acgatcaatcctcaactcgcggaaatgtccaattcacaaagacatcagtatggaaaggga
aggcaacgctggagtaacaaccgaaacccaaaggacagcaattcattgggtagtccaagg
aataaccatagtcccaatacaaatggctggcagaatcagcatatcattcaaccgagccag
atgaatggtggccaggaacgtcaaatgatgcggtcacaaaatacttatcagaataatcga
caaggcggatatcagaacaattatcaacaacaacaacaacaacaacaacagacaactgtt
gcgcaaacagcacaacaaccgcagcagcaccatcatcaacagcagcaacagcaacaacca
cggcaatctaatggctatcatcactctggaggatatcaggcgaacggcaacggaattcaa
aacacttatcaggcaacgtcggcacctcgttaccaaaatcgtgttggctatcaaggaagt
cgcttcaacaatcgccaaagcactttcaacggaggacagaatgggcaatgcatgtactca
atgccgccgcctttcatgatgccttccgccggacccactgacagcagcattcaaagtcta
gttaacaacaagttcttccaaccgaccaatcgaccaccgcctggtcccaatgcttgcgcc
tatcagtcgatgggctacggtcagttccaagccgttccaccctatggatacccctaccca
ccgacgcccgttcaacagtga
DBGET
integrated database retrieval system
