Leptopilina heterotoma: 122499641
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Entry
122499641 CDS
T08438
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122499641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122499641
03009 Ribosome biogenesis [BR:
lht03009
]
122499641
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122499641
Spliceosome [BR:
lht03041
]
Complex A
U1 snRNP components
U1 related factors
122499641
Complex B
122499641
Ribosome biogenesis [BR:
lht03009
]
Eukaryotic type
Pre-60S particles
Helicases
122499641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122499641
NCBI-ProteinID:
XP_043464028
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MLRSFSGVLGVLRRTYGGYRNGASSTSNNRMGGGSGGGQRNGYGTGGGGGGSRFGGRGGG
GNSYGGNAGRNLNNPKLSGGSLRKPNWDYENLKPFKKDFYVPHDNVQSRHLREIEQFRDE
NKITLKGSRVPNPIKYFEEGNFPDYVMQEIRKQGFNEPTPVQAQGWPIAMSGQNMVGIAQ
TGSGKTLGYILPAIVHINSQQPLNRGDGPIALVLAPTRELAQQIQSVANDFGSLSYVRNT
CIFGGAPKGPQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFE
PQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYIQLNIGSLTLAANHNILQIVDV
CQEHEKETKLGTLLQEIGNANDDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQ
QERDYVLKEFRNKRGGILVATDVAARGLDVDDVKYVINFDYPQSSEDYIHRIGRTGRSQS
TGTSYAFFTPQNCKQAKDLISVLKEANQIINPKLSELASRGGGGGGAYGNKNRWGYGGGR
GRENTFSGSHKRFDSGRNYNYS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttacgctcgtttagtggtgtacttggagttttacgccggacttacggaggataccgc
aatggtgcatcgtcgacgagcaataatcgcatgggcggcggaagtggaggaggacaaaga
aatggatacggaactggaggaggaggaggaggttctcgattcggaggccgcggaggtggc
ggcaacagctacggcggaaatgcaggacgcaatctgaacaatccaaaactctctggaggc
agtttgagaaaacccaattgggactatgaaaatctaaagccattcaagaaggatttctac
gttcctcacgacaacgttcaatcgcgtcatcttcgtgaaattgagcaattccgagacgag
aacaaaatcacattgaaggggagccgagtgcccaaccccataaagtacttcgaagagggc
aattttccggattacgtgatgcaggaaatcagaaagcaaggcttcaacgaacccactcca
gtgcaagctcagggctggcccatcgctatgtctggtcaaaacatggtcggaattgcacaa
accggctcgggaaaaaccctcggctacattctgccggcgatcgtccacatcaacagccaa
caaccattgaatcgtggagacggtcccattgcgttggtgctcgcacccactcgggagctt
gcgcaacaaattcaatctgtcgcaaacgactttggctctctgtcgtatgtgaggaacact
tgcatctttggcggagcgccgaagggaccacaggcgcgtgacctcgagcgcggtgtggaa
atttgcatcgccacgccaggacgtttaattgactttttagaacgcggcacgacaaatctt
cgaagatgcacgtatctcgttcttgacgaggccgatcgcatgttggacatgggattcgag
ccacaaatccgaaaaatcattgaacaaatcagacccgacaggcaggtccttatgtggtct
gccacctggccgaaggaggtgcgcaacctcgccgaggagtatcttaccgactatattcaa
ctcaacatcggctcactcactttggctgccaatcataatatccttcaaattgttgatgtt
tgccaagaacatgagaaggaaacaaaattaggaacattacttcaagaaattggaaacgcc
aatgacgatggaggcaaaactattatttttgttgaaactaagaagaaagttgagaacatc
acaagaaacattcgtcgttatgggtggcccgctgtttgtatgcacggcgataaatcacaa
caggaacgtgattatgttctcaaagaatttagaaataaaagaggtggaattcttgtagca
actgacgttgctgctcgtggtttagacgttgatgacgttaagtacgtaataaacttcgat
tatccacaatcgtcagaagactatatccataggattggaaggacaggacgtagtcaaagc
acaggcacaagttatgcctttttcactccacaaaattgtaaacaggcaaaggatctcata
agtgtgcttaaagaagccaaccagattatcaacccaaagcttagcgaactagcgtcaaga
ggaggtggaggaggtggtgcttatggcaataaaaatcgatggggttatggaggaggaaga
ggaagggaaaacactttctctggatcgcacaagagatttgattctggtagaaattacaat
tatagttga
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