Leptopilina heterotoma: 122500013
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Entry
122500013 CDS
T08438
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122500013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122500013
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122500013
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122500013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
122500013
NCBI-ProteinID:
XP_043464618
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLATSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKGKLEKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKEDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDADKKTKPVKPTA
VRPLINSQSSIPTSGNITTVKPNLLPSSTPSKAVPLIPNHNSQSSTSNHVSMTNAGNFAT
VAASHSNSQVVHSTSTKTPCKVEHYSCTIEETSHGNENGLLSSSSTSSVTSNPPQPISQQ
HSNPSLTQTSHILHSQQNQNHNCETEISIPVPPSSSPHSSVSSSSSPLPVNSCSPAPSSA
NGLISKLPDGLSSLKSIAQQVIVRAGLEIPSSEANRNIFDNSKSNINNNNITSEAHIPPL
LGVAPLGTVPLQKEHQHQFQMMEAAYYHMPHPSDSERLRAYLPRNICPTPSYYQQIQLPH
SDTVEFFQRLSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIIN
EEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagataggtgccttaaaaaagtaacagaa
ggagtagaaactttcgaagacatttggcaaaaagttcacaatgctacaaacagtaatcaa
aaagagaaatacgaggctgaccttaaaaaggagatcaaaaagcttcaaaggctacgcgat
cagatcaaaagctggattgcatctggagaaattaaggataaaagcacactactcgattat
agaaagctaattgaaactcaaatggagagattcaaagtggttgaaagagaaacgaaaact
aaggcttattccaaggaaggtctaggagctgcccagaaacttgatccggctcaaaaagaa
agagaggaagttagcaattggctggcgacctcaatagatgctctaaatttacaacttgat
acgtttgaatctgaaattgaatcccttcttgctggtaagaaaaaaaggttagacaaagac
aaacaggatagaatggatgagcttaaggggaagctcgagaaacatcgatatcatattcgc
aagttggaaacgttgcttcgaatgttagataatatgtctgtcgaagttaacacgataaaa
agaataaaggaggatgttgaatattatattgaatcatcgcaagagcctgactttgaagag
aatgaatatatttacgacgatattatcggtttggatgaggttgaattatctggagttggg
attccttcttcggcaactacagatagtaataatagtaatgaaactggaggaactccgacg
tctaccaattctgggacttcgcccataccctcaccccctctgagttcgactatgcataat
cattcgagtgatagttctacagatgcagacaaaaagactaagcctgtgaagccgacagca
gtgaggccattaataaattctcagtcaagcattccaacttcagggaacattacaactgtg
aagccaaatctactgccaagcagtactcctagtaaagcagttcctttaataccaaaccat
aattctcaaagttcaacaagtaatcacgtatctatgaccaatgcaggtaactttgccacc
gtggcagcgtcgcacagcaattctcaagtcgttcattctacttctactaaaacgccatgt
aaagttgaacactacagctgcacgattgaagaaaccagtcatggaaatgaaaatggactt
ttatcctcctcatccacatcgagtgttacttctaatccgccgcaaccgatttcgcagcag
cacagcaacccatcgctcacgcaaacctctcatattctccatagtcaacaaaatcaaaac
cacaactgcgaaacggaaataagcatacccgttccaccgtcgtcgtcgccacattcttct
gtcagtagcagttcgtcaccattaccagtaaactcctgttcgccggcgccttccagtgcc
aacgggctcatttccaaacttcccgatgggttgtcttctctcaagtcaatcgctcaacaa
gtcatcgttcgagccggtttggaaattccctcctcggaagcgaacagaaatatttttgat
aattccaagtcgaatatcaacaacaacaacatcacttcagaagcgcacattccaccacta
ctgggtgtggcacctttgggcacagttccgcttcagaaggagcatcagcatcagttccag
atgatggaggccgcctactatcacatgcctcatccctccgattcggaacgcttgagagca
tatctacccagaaacatatgtcccaccccatcttactatcaacagatacaacttccacat
tcagacactgtagaattcttccaacgtttgtcgaccgaaacgctttttttcatattttat
tatatggaaggttccaaaggacagtatctagcagcgaaagcattgaagaaacaaagttgg
aggttccatactaagtacatgatgtggtttcaaagacacgaagaacccaaaattattaac
gaagaatacgagcagggaacttacatttacttcgattacgaaaagtggggtcaacgaaag
aaagaaggctttacattcgagtacaaatatctagaggatagagacctcaattaa
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