Leptopilina heterotoma: 122500336
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Entry
122500336 CDS
T08438
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122500336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122500336
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122500336
mRNA degradation factors
3'-5' decay
Pan complex
122500336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
122500336
NCBI-ProteinID:
XP_043465158
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MDLYYTSQTNGVPLESKLAVYMNRQSPGITLTPTAMNSSVVTKQLSNLSLDSQKKSPGPA
EFIPGRTSCLTSSNSSSPNLFNNSYHSQENVGGTTYFYLGNMSDTLTSEEGTSEIAGNIG
AGQVGYVYPGTPSHLHPVKPTKSSSNSTSAPSTPPPQSNPSYFVSENLRNDIFQKNALTL
EQPDLVQFPDLPNEVDSYHELCPLEPIHKPVSSVLGYQTSTYKATNIKTGTRYCLRRVHD
FRLGNTKCMILVDMWKRLAHTNLVQLREVFTTKAFGDHSMVFVYDYHPGSETLLTKHFSA
TELNGFADPFSSEPNSSRSFTHSKSNILRQQHSNLLPESVIWSYIIQLTAALRVIHAAGL
AYRCLDPTKVLLTSRTHLRLSCVALPDVVTLDGNATNPLGLIPHYQQEDLIALGKMVLAL
ACRSLLAIHRDNMQTSLELVARSYSTDLRNLILYLLSNQQRRSVTDLMPMIGARFYTQLD
AAQLRSDVLENELSKELENGRLFKLIVKLTTINERPELNMEPTWAETGDRYMLKLFRDYV
FHQVTAEGRPWLDMAHVVSCLNKLDSGSYDKVCLMSRDEQSVLVVSYAELRQCLDTSFEE
LVQSSKEVA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatctttactatacttctcaaacgaatggagttccattggaatccaaacttgctgtc
tacatgaatcgacaaagtccagggataacgctaaccccaactgctatgaattcatcagtt
gtaaccaaacaattgtccaatctttctctcgattcgcagaaaaaatctcctggtcctgcg
gaattcattccgggaagaacctcatgtctcactagcagtaatagcagttcaccgaatctt
ttcaataattcctatcattctcaggaaaatgttggtggcactacttatttttatctggga
aatatgtccgataccctgacctctgaagagggtacttctgaaatcgctggaaatattggt
gcaggacaagtgggttatgtgtatccaggaacaccttctcatcttcatcctgtgaagcct
acgaaatcctcatcaaatagtacatcggcaccctcaacgcctccaccgcaatcaaatccc
agctatttcgttagtgagaatcttcgaaacgatatattccaaaaaaacgctttaacttta
gaacaaccagatttagttcagttccccgatttgcccaatgaagtcgacagctatcacgaa
ttgtgccccttggagccaattcacaaacccgtctcatcggttctcggttatcaaacatca
acgtacaaagcgaccaacattaaaactggaactcgttactgtttacgcagagtgcacgat
ttcagattaggtaatacgaagtgtatgattctggttgatatgtggaaaagacttgcccat
acgaatttagtgcagttacgagaagtttttaccacgaaggcctttggtgatcattccatg
gtatttgtttacgactatcatcctggttcggaaacacttctaacgaaacatttctcggcg
actgaactcaatggatttgccgatccgttttcttctgaaccaaattcatcgagatcgttt
acgcactcgaagagcaatattttgagacagcagcacagtaacttgcttcctgagagtgtt
atttggagttatattattcaacttacggctgcacttcgagttattcatgcagcaggactt
gcatacagatgtctggatcctaccaaagtattacttacctctcgaactcatcttcgattg
agttgtgtggctctaccggacgtcgtcacgttagatggcaatgcaacgaatcctttgggt
cttattccgcattatcagcaggaggacttgattgctttaggaaaaatggttcttgctttg
gcttgtcgcagtcttttggctattcatcgtgacaatatgcaaacatctttggagctcgtc
gcacgatcctattccaccgatcttcgaaatctcattctgtatcttctttcgaatcaacaa
cggagaagcgttacggatttgatgccaatgatcggcgcgcgattttacacgcaattggat
gcggctcaattgcgttccgatgtacttgaaaatgaactttccaaggaactggaaaatgga
agactgttcaaattaattgtcaagctgacgacaataaacgagaggcctgaacttaacatg
gagccaacgtgggccgaaaccggggaccgctatatgcttaaattatttagagattacgtt
tttcatcaagtcaccgctgaaggtcgtccttggctcgacatggcgcacgtcgtctcctgt
ctgaacaaactcgattcaggatcctacgataaagtgtgtctgatgtcccgggacgaacaa
agtgtgctggtcgtgagttacgcggagctgcgacaatgtctggacacatcattcgaggaa
ctggtacaatcttcaaaagaagttgcttag
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