Leptopilina heterotoma: 122500998
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Entry
122500998 CDS
T08438
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122500998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122500998
03009 Ribosome biogenesis [BR:
lht03009
]
122500998
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122500998
Spliceosome [BR:
lht03041
]
Complex A
U2 snRNP components
U2 related factors
122500998
Complex B
122500998
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122500998
Ribosome biogenesis [BR:
lht03009
]
Eukaryotic type
90S particles
Helicases
122500998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
SRP54
nSTAND3
ResIII
Flavi_DEAD
ABC_tran
AAA_30
T2SSE
ATPase
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
122500998
NCBI-ProteinID:
XP_043466133
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MSKPPKRRIEVVDPYVKRKPDGSFASTSPAIATPAKSQIQLNPYTGLPYTPRYHEFYKKR
ITLPVFEYRTDFMRLLAQDQCIVLVGETGSGKTTQIPQWCVEYSKSIGSKGVACTQPRRV
AAMSVAQRVSEEMDVALGQEVGYSIRFEDCSSAKTILKYMTDGMLLREGMSDPMLDAYQV
ILLDEAHERTLATDLLMGVLKEVIKQRKDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRT
HPVEIFYTPEPERDYLEAAIRTVIQIHMCEEVAGDLLLFLTGQEEIEEACKRIKREMDNL
GPEVGELKCIPLYSTLPPNLQQRIFEPAPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFV
IDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQD
NTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLT
DLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAKKLADEAKMR
FAHIDGDHLTLLNVYHAFKQNMEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFQLKRT
STDFTSKDYYINIRKALVNGFFMQVAHLERNGHYLTIKDNQVVQLHPSSCLDHKPEWVIY
NEFVLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQSRIESKQFQEGF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacctcctaaacgaagaattgaagttgtggatccatacgtcaagcgaaaacct
gatggatcattcgcaagtacttcacctgcaattgcaacacctgcgaaatcgcaaatacaa
ctcaatccatacactggattgccttacacaccccgttatcatgaattctacaagaaacga
attactctacctgtatttgaatatcgaacggattttatgcgactcttggcacaagatcaa
tgtattgttctcgtaggtgaaactggctctggaaaaacgacacaaattccacaatggtgt
gtagaatattcgaaaagtataggaagcaagggtgtcgcttgtactcaacctcgtcgagta
gctgctatgagtgtggcgcaaagagtttcggaagaaatggatgttgctctaggacaggaa
gtgggttacagtattcgtttcgaggattgcagttcagcgaaaacaatattaaaatacatg
acagacggtatgcttttgcgtgagggtatgtcggatccaatgctcgacgcttatcaagtg
attttacttgacgaagctcacgaaagaacattggccaccgatttattgatgggtgtttta
aaagaagttatcaagcaaagaaaagatcttaaattagttattatgagtgcaacattagac
gctggtaaatttcaacaatatttcgataatgcaccattaatgaacgttcctggacgaact
catcctgtcgagatattttatacacccgagccggaaagagattatttggaagccgctata
agaacagtaattcaaattcacatgtgcgaagaggttgcgggcgatttacttttattttta
actggccaagaggaaattgaagaggcttgcaagagaattaaacgggaaatggataattta
ggaccggaagttggtgaacttaaatgtataccattgtattcgacattgccaccgaattta
cagcagagaattttcgaaccggccccaccgacaaagccaaatggtgcaattggtcgtaaa
gttgttgtatcgacaaatattgccgagacgtctttgaccattgacggtgttgtttttgtc
attgatcctggttttgcgaaacaaaaggtatacaatcctagaataagagttgaatcgttg
ttggtttcaccgataagtaaagcctcagcacaacaacgagctggacgtgccgggcgaact
cgtcctggaaaatgcttccgactttacaccgagaaggcatataaaaatgaaatgcaagat
aatacttacccggaaattttacgctcgaatcttggtagcgttgtgttgcaattaaagaag
ctcggaattgatgatttagtacattttgatttcatggatcccccggcaccggaaacttta
atgagagccttagaattattaaattatctagctgctcttgacgacgatggaaatttgaca
gatttaggagcagttatggccgaatttccattggatcctcaactcgcaaaaatgttaatt
gcttcttgtaatcacaactgtagtaatgaaattctcagcataacggctatgttatcagtc
ccgcagtgctttgtgagaccaaatgaggctaagaaacttgccgatgaagctaaaatgcgt
ttcgcacacattgatggtgatcatcttacacttctgaatgtttaccacgcttttaaacaa
aatatggaagatccccaatggtgttatgataatttcgtcaattaccgatcattgaaaagc
ggcgataatgtgagacaacaattgagcagaattatggacagatttcaattgaaacgaaca
tctactgactttacctccaaagattattacattaatatcaggaaagcattggtcaatggt
ttcttcatgcaggtggcacatttagaaagaaatggacactatctcacaataaaagataat
caagttgtacaactacatccaagcagttgtctggaccacaaaccagagtgggttatttat
aatgaatttgttttaactacaaaaaattacatccgaacagtcactgacatcaaacctgat
tggctgttgaagattgcaccacagtattatgatttacaaaatttccctcaatgtgaagca
aagagacaattggaagtaattcaaagtagaattgaatcgaaacaatttcaagaaggcttc
taa
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