KEGG   Leptopilina heterotoma: 122501107
Entry
122501107         CDS       T08438                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
lht  Leptopilina heterotoma
Pathway
lht03013  Nucleocytoplasmic transport
lht03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lht00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122501107
  09122 Translation
   03013 Nucleocytoplasmic transport
    122501107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lht03019]
    122501107
   03041 Spliceosome [BR:lht03041]
    122501107
Messenger RNA biogenesis [BR:lht03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122501107
Spliceosome [BR:lht03041]
 Complex C
  Other components
   EJC/TREX
    122501107
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122501107
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd eIF2A Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N NBCH_WD40 RMC1_N B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C PD40 Beta-prop_ELP1_1st WD40_RFWD3 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 122501107
NCBI-ProteinID: XP_043466314
LinkDB
Position
Unknown
AA seq 323 aa
MTEMAPSSDINFISYFKSHNKVREQQSHTAKVHSVGWSCDGKYLASGSFDKCVCVFSLCT
DRLKQETTFRGHLGSVDQLCWHAFHPELLSTASGDKTVRIWDMRSQKCTANIGTRGENIN
ISWSPDGNTIAVGNKEDLVTFIDARAQKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCV
HILSYPDLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDAEELCCLRTFSRLE
WPVRTISFSYDGMLLAAASEDLVIDVGEVESGEKITDIPVEAATFTVAWHPKQYLLAYAC
DDKDTYDRKRDAGSLKVFGFPNE
NT seq 972 nt   +upstreamnt  +downstreamnt
atgacagaaatggcgccaagttctgatataaattttatttcctactttaaaagtcacaat
aaagtacgagagcaacaaagtcatacagcaaaagttcacagcgttggatggagttgtgac
ggaaagtatttagcttctggttcttttgacaaatgtgtttgcgtgttttcgctttgcacc
gatcgcctgaaacaagaaacgacgttccgtggccatctgggaagtgtagatcaactttgc
tggcatgcttttcatccagaattattatcgacagcgagcggtgacaagacagtgcgaata
tgggacatgcgatcacagaaatgtacagcaaatataggaacaagaggtgaaaatattaat
atatcatggtctcctgacggaaacacgatagctgttggaaacaaggaagatcttgttacg
ttcattgatgccagggcccaaaaaattagagctgaggaacagtttaattttgaagtaaac
gagatctcttggaataaagactctgatacattttacttgaccaatggacaaggttgtgta
cacatattaagttacccagatttggaattgctacatgtgatcaaagcccacccaggaact
tgtatttgtatcgagttcgatcctactggacgatattttgctacaggatcagccgatgca
cttgtgtctctttgggatgcagaagaattgtgctgtttgagaactttttcaaggctggaa
tggccagtgagaacaatttccttctcctatgatggaatgctccttgctgcagcttctgag
gatcttgtcattgacgttggcgaagttgaatcaggggagaaaataactgatattcctgta
gaggctgcaacatttactgtagcatggcatcccaaacagtatttattagcttacgcttgt
gatgataaggacacgtatgacaggaaaagagacgccggaagtttaaaagtatttggtttt
ccaaatgaataa

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