Leptopilina heterotoma: 122503311
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Entry
122503311 CDS
T08438
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
lht
Leptopilina heterotoma
Pathway
lht03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122503311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122503311
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122503311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Phage_tail_terminator_7
XhlA
Motif
Other DBs
NCBI-GeneID:
122503311
NCBI-ProteinID:
XP_043469732
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MSFGGGFGTSTPASAPSFTFGQTATATPTVKPAGFGTPSFGFGTSTPAAANPSLFGTPAP
QPTGFGTAAGFGTPAATAFGSTTTTTNTFSTPLTSFGFGAPAPAAAATPFGATPATSTGF
AALSTPATTSTIGGFGSFGGFGTTATTTAAAPSLFGGFGATNTAATGFGTSTGFGGFGAK
PATTTATGFGGFGTGTSFMGFGGSLAQPQQQTQLQQQQLQQQQQQQQSANTISEALYNAV
FNCQLFNDERDSTIARWNLIQALWGTGKAYYSVNAAPIELNQENPLCRFKAIGYSRMPDA
DNNEGLVVLCFNKKEQEIKEGKQNLIASLNTILGNKPNLTVTIDSIKSTGENKCQSTVFV
SEKGVTGTSRKIPANELFTYFTQTMQKQQLVQKGVENIYPFVKLDPTQLKEYLENPPCSI
DPRLWKQAQLDNPNPDLYIPVPMIGFHQVKHRLKCQEEETARHRAFLDMAAERIQELQRQ
HTATQAKLKDHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTNRFESMHSQISAP
TQFKGRISEMLSQLRMRRHVDSQTQERYAMDPIAQDDIKTYLSMEQQGMEQLIATINTDV
ECLKIIKDGMSELVGTPGTS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtggaggatttggtacttccacgccggcttcagcgccttcgtttactttc
gggcaaaccgctactgccacaccgactgtaaaaccagccggctttggaacgccgtccttt
ggattcggcaccagcaccccggcggcagctaatccctcattatttggaacaccagctcct
cagcctacgggttttggaactgcagctggtttcggaactcctgcggcaactgcttttgga
tcaacgacaacgaccaccaacacatttagcacaccgttgacgagttttggatttggagca
ccagcaccagcagcggcggcaacaccatttggagcaacgccagccacatcaacgggtttc
gctgctctttctactccagccacgacgagcaccatcggcggttttggaagttttggaggt
ttcggaacaacagccacaacaacagcagcagcaccaagtttatttggaggttttggtgca
acgaacacagccgccactggttttggaacttccactggattcggtggatttggcgctaaa
cccgcgaccaccactgctacaggatttggtggttttggtaccggtacaagttttatgggc
tttggcggaagtctggctcaaccacaacaacaaacacaactgcagcagcagcaactacaa
caacaacaacaacaacagcaaagtgcaaatacaatttcagaagcactttacaatgcagtc
tttaattgtcaattatttaatgatgaacgtgatagtacaatcgcaaggtggaatttaata
caagcattgtggggaacgggaaaagcttattattccgtaaatgcagcaccaatagaactg
aatcaagagaatccattgtgcagattcaaagcaattggctacagtcgaatgccagatgca
gataataatgagggcctcgttgttctctgcttcaacaaaaaggaacaagaaataaaagag
ggaaaacaaaatttgattgcctctttaaatacaatattaggcaacaaaccaaatctcact
gtcaccattgattcaataaaatcaaccggtgagaataaatgtcaatcaacagttttcgtc
tccgaaaagggagtcactggtacgtcgagaaaaattcccgccaatgaattgtttacttat
ttcactcagacaatgcaaaaacaacagctcgttcaaaagggggtagaaaatatttatcct
ttcgtgaaacttgatcctacgcagttaaaggaatatctcgaaaatccaccgtgctcgata
gatccgcgcttgtggaaacaggcacagttggataatcctaatccagatttatacataccc
gtgccaatgataggatttcatcaagtgaaacacaggttaaagtgtcaagaagaggaaacc
gctaggcatagggcttttcttgatatggcagcggagagaatacaggaattgcagaggcaa
cacacagcgacgcaggcaaaactaaaagaccatcgacgaacacttttggaacttcagcac
agagtattacaggtgttggtgcgacaagaaataactagaaaagttggtctctccttgcaa
cctgaagaagaagttttaaccaacagatttgaatcaatgcactctcaaattagtgctcct
acgcaatttaaaggaagaatcagtgaaatgttatcacaattgagaatgagaaggcatgtt
gactctcaaacgcaggaacgatacgctatggatcctattgctcaagatgatattaaaact
tatctaagtatggaacaacaaggcatggaacagttgatagctacgataaatactgatgtg
gagtgtttgaaaattattaaagacggtatgtccgaactcgttggaactcctggcacttcc
tga
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