Leptopilina heterotoma: 122504449
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Entry
122504449 CDS
T08438
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122504449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122504449
Enzymes [BR:
lht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
122504449
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
122504449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
AAA_14
ATP_bind_1
ATPase_2
TniB
Motif
Other DBs
NCBI-GeneID:
122504449
NCBI-ProteinID:
XP_043471505
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MMENVKKEYKLEPDSELRFEIESKSKKITIELKSGLAELFGTELVVNKKYTFSGTSVAVI
TWQGCTIEVEGDPDIIYTSKESPMTLYLNCHAVLERLRELSERKNEKGPITMIAGPCDVG
KSTLSRMLVNYAIRMNKSPIYVNLDVGQAEFGLPGSVGAVIPKNPASVEGGFTEEAPLLF
HFGSSSPLCNQTFYKLLTSRLAQVCNERMRLNRNERHSGIIINTCGCTKGDGYRILIHAA
YAFEVDAILVIDQQQLYNDLLRDMPKFVKVSLLPKSSGVIKRNETQRAESRNSLIHNYFY
GIPKAQLHPFKIELKFEDISIYRVTISAGFSSNMTVAKKSPDTTLMPVKPIPNMKNRLLS
VSLAKLNQDDIVESNISGFLHVQDVNMHEKIMTVLSPEPKLTKNLVLLLSEVRYWNDNE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgtaaaaaaggaatataaattggaacccgattctgaattgcgttttgaa
atagagtcaaaaagtaaaaaaataactatagagctaaagtccggcctggcagaattattt
ggaactgaacttgtagtaaataaaaaatacacattttccggaacaagtgtggctgtcatt
acatggcaaggatgcactatagaagtggaaggagatccagatataatttatacatcaaaa
gaaagtcccatgacactgtatttaaattgccatgcagttttagaacgtctccgtgaactg
tctgagaggaaaaacgaaaaaggtccaattaccatgattgctggtccttgtgatgtagga
aaatcgacattgagtagaatgctcgtaaactatgccatcagaatgaataaaagtccaatt
tatgtaaacctcgatgtaggtcaagcggagtttggtttacctggtagtgtaggagctgta
ataccaaagaatccggcgagtgtcgagggaggtttcactgaagaagcacctctacttttc
cactttggttccagttcaccactgtgcaatcaaactttttataaattactcacctcaaga
ctggctcaagtttgcaatgagcgtatgaggttgaatcgaaatgagaggcactcgggaatt
attatcaatacttgtggttgcacaaaaggggacggctacagaattctaattcatgctgca
tatgcttttgaagttgacgccattcttgtcattgatcagcagcagctttacaatgatctg
cttcgcgatatgccaaaatttgtcaaggtgtctctcttaccgaaaagtagcggggtcatc
aaaagaaatgagactcaaagagctgagtctaggaacagtttaattcacaattatttctac
ggcattccaaaggcccagttacatcccttcaaaatagaattaaaatttgaagatatttcc
atttacagagtaactatttctgcagggttttcatctaatatgactgttgccaaaaaatct
ccagacacaacattaatgcctgtcaaaccaattccaaatatgaaaaatcgcttactttcc
gtttctttggccaaattaaatcaagacgatatagttgaatcaaatatttctgggttttta
catgtgcaagacgtcaatatgcatgagaagataatgacagtattaagtccggagccgaaa
ctaacgaaaaatttagtactattgctttcagaagttaggtattggaatgacaatgaatga
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