KEGG   Leptopilina heterotoma: 122504808
Entry
122504808         CDS       T08438                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
lht  Leptopilina heterotoma
Pathway
lht03030  DNA replication
lht03410  Base excision repair
lht03420  Nucleotide excision repair
lht03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122504808
   03410 Base excision repair
    122504808
   03420 Nucleotide excision repair
    122504808
   03430 Mismatch repair
    122504808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lht03032]
    122504808
   03036 Chromosome and associated proteins [BR:lht03036]
    122504808
   03400 DNA repair and recombination proteins [BR:lht03400]
    122504808
DNA replication proteins [BR:lht03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122504808
  DNA Replication Termination Factors
   ELG1-RFC complex
    122504808
Chromosome and associated proteins [BR:lht03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122504808
DNA repair and recombination proteins [BR:lht03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122504808
  Check point factors
   HRAD17(Rad24)-RFC complex
    122504808
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 Rad17 AAA_16 AAA_24 Mg_chelatase Viral_helicase1 AAA_19 AAA_11 RuvB_N AAA_assoc_2 AAA_18 nSTAND3 MeaB DEAD AAA_5 AAA_28 NTPase_1 ABC_tran IstB_IS21 DNAX_ATPase_lid AAA_23 AAA_3 MipZ SRP54 AAA_29 RNA_helicase AAA_25 FtsK_SpoIIIE AAA_30
Other DBs
NCBI-GeneID: 122504808
NCBI-ProteinID: XP_043472002
LinkDB
Position
Unknown
AA seq 350 aa
MTGENNIEEPMEVDSTPSTSKSNKETLISSDKSTTPWIEKYRPQVFSDIVGNDDTVSRLA
VFAQHGNAPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNDRGIDVVRNKIK
MFAQKKVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNSEKIIEPI
QSRCAMLRYGKLTDAQVLAKVIQVCNKENISHTDDGLEAIIFTAQGDMRQALNNLQSTFN
GFGHVNCENVFKVCDEPHPVLVKGMLELCTKGDISNAYKGMDQLWKMGYSAEDIISNVFR
VAKNLDIDEPLKLDFIKEIGETHLGIVDGISSLLQMNSLLGRLCRRSLKT
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgactggagaaaataatattgaagaaccgatggaagtagacagcactccatcaaccagc
aagagtaataaagaaactttaatttcatcagataaatcaactactccgtggatcgaaaaa
tatcgtccgcaagtattttccgacatcgttggaaatgacgacactgtatcgagattagct
gtttttgcgcaacatggaaatgctccaaacataataattgctggtccaccaggtgtagga
aaaactacaacaattctttgcttggcgcgcattttgttgggtccagcttttaaggaagct
gttcttgaattaaatgcttcaaatgacaggggcatcgatgtcgtcagaaataaaattaaa
atgttcgcacaaaaaaaggtgaatcttgctaaaggaaagcataaaataattattctggat
gaagccgacagtatgactgatggtgcacaacaagctttacgcagaacaatggaaatttat
tcgcatactacgagatttgccttagcttgcaacaatagtgaaaaaattattgaacccatt
cagtcaagatgtgctatgctgcgatatggaaaattaacagatgcacaagttttagcaaaa
gtcatccaagtatgcaataaagagaatatatcacacactgatgatggtttggaagccata
atttttactgctcaaggtgatatgagacaagcactcaataatttacaatctacttttaat
ggctttggccacgttaactgtgaaaatgttttcaaagtatgcgatgaaccgcatccagtt
ttggttaagggaatgctcgaactctgtacaaaaggagacatctccaatgcatataaagga
atggatcaattatggaaaatgggatattcggcagaagatattataagcaatgtatttaga
gttgctaagaatcttgacattgatgaacctttgaaattagattttattaaggaaattggt
gaaacgcatttaggaattgtagatgggataagcagtcttctgcaaatgaatagtctttta
ggtcgtctgtgtcgtagatcactaaagacgtga

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