Leptopilina heterotoma: 122505237
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Entry
122505237 CDS
T08438
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122505237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122505237
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122505237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122505237
NCBI-ProteinID:
XP_043472666
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MDSQFKTIHPVKYLRDHFSKEIRPDGREFMSYRPVSINVSSIKQADSSCVFKIGNTTVIC
GIKAELCTPKASTPNCGFAIINVNLPPLCSPKFRPGPPSEEAQCATKIVDEILSNSSILD
LKDLCICKDKLAWVLYCDLVCIDFDGSVIDVCIGALMSALETLTLPEVTYDTETKLIVTN
PEKRIPLPLKPITVSLTFASFDERILIVDPTEDEESLSHSRITIAVNANDMCFVHKSGGT
PMSDKLITKSIAIAKKRAEAIRKLIETATTPFKIS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaattcaagacaattcatccagtcaaatatcttcgagatcatttctcgaaa
gaaattcgtccggatggtcgggaatttatgtcctatcgtccagtcagcataaatgtttca
tcaattaaacaagccgacagttcttgtgttttcaaaattggaaacacaactgttatttgt
ggaattaaagccgaactttgcacaccaaaagcctcgacaccaaattgtggtttcgctata
attaacgtaaatttaccgcccctttgttctcccaaatttcgacccggtccacctagtgaa
gaagctcaatgcgcaacgaaaattgtcgacgaaattttatcgaattcgtcaattttggat
ctaaaagatctttgcatttgtaaggataaattggcatgggttttatattgcgatctcgtt
tgcattgatttcgatggatctgtaattgatgtttgcattggagctttaatgtctgcctta
gaaactttgacattaccggaagttacatatgacacggaaacaaaactcatagtcacaaat
cccgagaagagaattccacttccattgaaaccaataaccgtttctttgacattcgcatcg
ttcgatgaacgaattttaattgttgaccctacagaagatgaggaaagtttatctcacagt
agaataacaattgccgttaacgccaatgacatgtgttttgtacacaaatcaggtggaact
ccaatgtcagacaaattaataacaaaaagcatagcaattgcaaagaaacgagctgaagca
ataagaaaattaatagaaaccgcaacgacaccttttaaaatttcttga
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