Leptopilina heterotoma: 122505328
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Entry
122505328 CDS
T08438
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122505328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122505328
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122505328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_12
TPR_1
TPR_8
ANAPC3
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
122505328
NCBI-ProteinID:
XP_043472775
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MLEMNELNEPRIKDIEASVISDEERELSQHALSAFQKGSFASCLMYLNKLEVLRPKDLKV
MHNNIVAEYFKSNLQQTEIFKKSLTAICGQMWSTDAVDAVDDVEKCVMRYNQAILLYHTR
QCKAALQIMIRLFSLIEPLVSEESLAQKVCLLLIELYIATGQPDAALTLVNYIERQFTVS
DLSKITLTDKEEFVKTSRELKEPKKDNSEIAIDAFRIKLMKCKVRIYLITNQLKLCIKEW
KSFVNMETTTNLSSIFLAANVEYLRGKCTKSMMLLNSLTPEQRQIKDYEESAAVLYYNNM
ACIHYSLDKPNLACFYLYKALEENEKAVKNFQTDDKEPLAPPPLYTLGVNRFSELQYNLG
ICYLVSGNCEKAFACFIKAIDKLQNSPKIWLRLAECCILDHNPTNGSNFNIMKRRQDLVQ
KIVVSGAYKKIVLTSSLSKDNNYPSKNLYYGITQLTLEFGMLCLKNALILLPVCTEALPV
NVIGQHNMQSSQTTIIENLNLKISILAASAYIALCLGDPTTALKHAKNLLAINNLPGAYI
MLGKLYAAESLILLDRINEAIEYLKPDTLLDLDISVASADSLDADKETAEEIDRKATKSW
YPTNLLTGKTVLLYNMAVAYAIRGQLDKSADIIGQLWKSKNTEYEVPIHVIMLALYIELN
LGRTDKWRSIIRRNYPQYFI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatgaatgaattaaatgagccgcggattaaagacattgaagcgtcagtcata
tctgacgaagaacgcgaactgtctcaacatgcgctgtcagccttccagaaaggttctttc
gcgtcatgcttgatgtatctaaacaagttggaagttctgaggccaaaggatttgaaagtt
atgcacaacaatatagtagctgaatatttcaagagtaacttgcaacaaactgaaatattc
aagaaaagtctaactgcaatatgcggccaaatgtggagcacagatgcagtggatgctgtg
gatgacgtggagaaatgcgttatgaggtacaatcaagcaattctactgtatcacacgagg
caatgcaaagctgctcttcagataatgattagattgttttcactgattgaaccgttagtt
tcagaggagagtctggctcagaaagtgtgcttacttctcattgaattatatattgcaacg
ggacagccggatgctgctttaacactagtcaattatattgaaaggcaatttacagtttca
gacttatcaaaaattaccttaacagataaagaggaatttgtcaaaacttcaagagaactg
aaggaaccaaaaaaagataattctgaaattgcaattgatgcttttcgaataaagctgatg
aaatgtaaagtaagaatatatcttattacgaatcagttgaaattatgcataaaggagtgg
aaaagttttgtaaatatggagacgaccacgaatcttagcagtatttttttggctgctaat
gtggaatacctacgagggaaatgtactaaatccatgatgcttttgaactcattaacgcca
gagcaacgacaaattaaggattatgaggaatcagctgctgttttatactacaacaatatg
gcttgtatacactactctttggataaaccaaacttagcctgtttctatttgtacaaggca
ttagaagaaaatgagaaagctgttaaaaatttccaaacagatgataaagaacctttagcc
cctccaccactttatacactgggagtgaacagattttccgagttacaatataacttggga
atatgttacctagtttctgggaattgtgagaaggcattcgcttgttttattaaggctata
gataagttgcaaaatagtcctaagatttggttgaggttggctgagtgttgtatattagat
cacaatcctacgaacggatcgaactttaacatcatgaagcgtcgtcaagatttagttcaa
aaaattgtggtctcaggagcctataagaaaattgttttaacgtcatcattatcgaaggat
aacaattatcccagtaaaaatttatattacggaataactcaacttactttagaattcgga
atgttgtgcttgaaaaatgcattaattctattgccagtttgcacggaagcgcttcctgtt
aatgtaataggtcagcacaacatgcaatcgtcacaaacaacaataattgaaaatttaaat
ctaaaaataagtattttggctgccagtgcttatatcgcattgtgccttggtgaccctaca
acagctttaaaacatgctaaaaatcttttagcaatcaacaatctcccaggtgcatacata
atgttaggaaagctgtacgccgcagaaagtcttattcttttggatcgaattaatgaagct
atcgagtatttgaagccagacactcttctggatcttgacatttctgtcgcatctgctgac
tctttggatgcagacaaagaaactgcagaggaaattgacagaaaagctacaaaatcttgg
tatccgacgaatctgcttactgggaaaactgtactgctttataacatggcagtggcctat
gcgattcgcggacaacttgataaatcagctgacattataggacagttatggaaatccaag
aatacagaatatgaagttccgattcatgtgattatgttggcattgtacatcgaactgaat
ttgggtcgaactgataaatggcgttcaattattagaagaaattatccgcagtattttatt
taa
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