Leptopilina heterotoma: 122505516
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Entry
122505516 CDS
T08438
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122505516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122505516
03036 Chromosome and associated proteins [BR:
lht03036
]
122505516
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122505516
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122505516
mRNA degradation factors
5'-3' decay
Decapping complex
122505516
Chromosome and associated proteins [BR:
lht03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122505516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
122505516
NCBI-ProteinID:
XP_043473129
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSGLGPKTDLTKMDDAGWKAKLKIPPKDARIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDAK
RDVIQALVIVPTRELALQTSQILIELAKHLDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLIDQNVANMDHCKILVLDEADKLLSQDFKGMLDHVISRLPQRRQILLYSATFPL
TVKQFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
TTQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVSRPEDNNSLEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacacatatgaattccaatcatatgctaaattctggtttgggtccaaaa
acagatctaacaaaaatggatgatgcgggttggaaagcgaagcttaaaatcccaccgaag
gatgcacgaataaaaacaagtgatgtaacagacacacgtggcaacgagttcgaggagttt
tgcctgaaacgagaattattgatgggaatttttgaaaaaggctgggaaaagccttctcca
attcaagaagccagcattcccattgcactctccggcaaagacatattggcgcgtgccaaa
aacggaacaggcaaaactggagcatattctattcctgttctcgaacaggttgacgcaaag
agagatgtgatacaggcgttagtaattgtgcccaccagagagttggcattacagacttca
caaatattgatcgagcttgcaaagcatttggatattaaggtgatggttaccactggtgga
acaaacttgcgtgatgatattatgaggatttatcagaaagtgcaagttatcatagccaca
ccaggtagaattcttgatctcatcgatcaaaatgttgcaaacatggatcactgcaagatt
ctcgtgttagacgaagctgacaaacttctgtctcaagactttaaaggaatgctggatcac
gtgatctcgagattaccgcagagacgtcaaatattgctttattcggccacatttcctctg
acggtgaagcaattcatggaaaaacatttgaaagatccatatgagattaatttgatggaa
gagctgactctaaagggtgtgacacaatattatgcttttgtacaggagcgacagaaagtc
cactgccttaacacgttattttccaagctgcaaataaatcagagtataatattctgcaat
acgacacagcgcgtggaattactggcaaagaaaattacagatttaggatattgttgttat
tatatccacgcaaaaatggctcaggctcatcgtaaccgcgttttccacgatttccgcgca
ggactgtgccgaaatttggtttgcagtgatttattcacgcgaggaattgacgtgcaagca
gtgaatgttgtgatcaattttgatttcccgaaaatggcagagacgtatctgcatcgtatc
ggccgctctggaaggttcggtcatttaggtattgcaattaatctaatcacatatgaggat
cgtttcaatcttcatcgtatcgagcaagaacttggcactgaaataaaaccaattccaaaa
gttatcgatccaagtttgtacgtctcgcgaccagaggacaataatagtttggaagagggc
aacgtgtcaaagtag
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