Leptopilina heterotoma: 122505950
Help
Entry
122505950 CDS
T08438
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122505950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122505950
03009 Ribosome biogenesis [BR:
lht03009
]
122505950
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122505950
Spliceosome [BR:
lht03041
]
Complex A
U1 snRNP components
U1 related factors
122505950
Complex B
122505950
Ribosome biogenesis [BR:
lht03009
]
Eukaryotic type
Pre-60S particles
Helicases
122505950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
PRAI
Motif
Other DBs
NCBI-GeneID:
122505950
NCBI-ProteinID:
XP_043473790
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MTMAYRDRDRGVDRRGGTGGGRGGSRGMGGSRGGRGGSRGGGDGGSSGRFGNRDGGGGGG
GGNIGGSRFGSGGGMGNRDSGFGNNNFKNRQPGERLRKPRWDMGSLQPFRKDFYQPHMNV
SNRSMHSVDSYRSNKEITVKGNNIPGPNVYFEEGGFPDYVLNEIHRQGFGEPTAIQAQGW
PIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLNRNDGPIALVLAPTRELAQQIQQ
VASDFGASSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYL
VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRNLAEEFLTEYIQINIGSL
QLAANHNILQIVDVCEEYEKEGKLMKLLEEISNEPENKTIIFVETKRKVDDITRAINRYG
WQAIGIHGDKSQQERDYVLNQFRGSRSAILVATDVAARGLDVEDVKFVINLDYPSNSEDY
VHRIGRTGRSQRTGTAYAFFTPANAHKANDLIQVLEEAKQVVNPKLYELSRNPGMYKRGR
FSGGRSSGGGSRGGSSRGGSSRGGTGGGRGGSGMRGGRDNNDRGSGRFDRGNAGGGDRGK
WGGGGSSGGMGGGGYGNKSYSQNSYGGSGSGSGGYSQNGSGYGNSGGGGSSGNYRQQNGY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggcgtacagagatcgcgatcgtggtgtcgacagaagaggtggaaccggtgga
ggacgtggcggtagtcgtggaatgggtggaagtcgtgggggaagaggaggaagccgagga
ggaggtgatgggggcagcagtggaagatttggaaatcgcgatggtggtggtggcggcggt
ggtggtaatattggaggaagtagatttggcagtggtggaggaatgggaaatcgcgacagt
ggatttggtaataataattttaaaaatcgtcaacctggtgaacgtctacgtaagccacgt
tgggatatgggttcactgcaaccattcagaaaagatttctatcaaccacatatgaatgtc
tccaatcgaagtatgcattccgttgattcctatcgttcaaataaggagatcacagtcaaa
ggcaataatataccgggtccaaatgtctactttgaagagggtggctttcccgattatgtt
ctaaatgaaattcaccgacagggattcggtgaaccgactgcaattcaagctcaaggttgg
ccaattgctctctcgggacgcgatatggttggcatcgctcaaaccggctctggcaaaact
ctagcctacattcttcccgctatcgtgcacattaatcatcagccgaggttgaatagaaat
gacggaccgattgcgcttgttttggcgccaacgagagaactggctcaacaaattcagcaa
gtggcgtcagatttcggcgcctcgtcccaagtgagaaacacctgtatattcggaggggct
cccaaaggaccccaagccagagatctagagcgcggagtggaaatttgcatagcaacaccc
ggacgtttaatagactttttagagcgagggacaacaaatcttcgtcgttgcacgtaccta
gtactggacgaagcagacagaatgctcgatatgggtttcgagccgcaaattagaaaaata
attgaacaaatcagacccgataggcaaacgctcatgtggtctgcgacatggccaaaagaa
gtgagaaatctggccgaggagtttttaaccgaatacattcaaatcaacattggctcactg
caattggcggcaaatcacaatattctacagattgtcgatgtctgcgaggagtatgagaag
gagggaaaactaatgaaactcctggaggaaatctccaatgaaccggaaaacaagacaatc
atctttgtggaaactaagagaaaagtcgatgatataacgagggctattaataggtacgga
tggcaggcaataggtattcatggggataagagtcaacaagagagagattacgttttaaat
caattccgaggtagcaggtctgctattttagtagcaacagatgtggcagctcgtggttta
gatgttgaagatgtgaaatttgttataaacctggactacccgtccaactcggaagactat
gttcaccgaattgggagaactggtcgatcgcaacgtaccggtactgcttatgctttcttc
acgccggcaaacgcacacaaggctaatgatttgattcaagtacttgaagaagcaaagcag
gtggttaatccgaaattgtacgaattgtcaagaaatccaggaatgtacaaacgtggcaga
tttagtggcggaaggtcaagtggtggaggtagtcgaggcggaagcagtcgaggaggcagt
agtcgagggggcacaggaggtggacgaggaggaagcggtatgcgaggaggccgagataat
aacgaccgaggaagtggaagatttgaccgtggaaacgcaggcggcggtgatcgagggaaa
tggggcggtggtggaagttctggcggaatggggggcggtggatacggaaacaaatcctat
tcgcaaaatagttacggcggaagtggtagcggcagtggaggttatagtcaaaacggcagc
ggatatggaaatagcggcggcggaggcagtagtggcaattacaggcaacaaaatggctat
taa
DBGET
integrated database retrieval system
