KEGG   Leptopilina heterotoma: 122506042
Entry
122506042         CDS       T08438                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lht  Leptopilina heterotoma
Pathway
lht03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lht00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122506042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lht03041]
    122506042
Spliceosome [BR:lht03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    122506042
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st PRP4 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 WD_LRWD1 Nbas_N
Other DBs
NCBI-GeneID: 122506042
NCBI-ProteinID: XP_043473949
LinkDB
Position
Unknown
AA seq 524 aa
MSDDEEIYVKKQKIVHYGSLEESERARIAAAADDGSDDDKDDSTPNKNSNSAMSAGNVHI
STEYMDLEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRHLGEPICLFGEGPAE
RRARLRELLASLGEDAIKKKHDDEEKPSQLVEKDTETWYHEGPDSLQIARQWIASYSLPR
AKARLENARQELELPGATRTARRQELLKKLQALSIYCSQIGDTRPISYCQFSPNSKVLAT
ASWSGSCNLWSVPDCSHLRTLKGHNCNVGCIVFHPKATIDDDLLANESEQICMLASCASD
GTVKLWGGGTGEKPLAEVEGHEPFRVSRIAFHPSGRFLGTCCYDSSWRLWDLEQQAEVLH
QEGHAKPVHCISFQCDGSVVATGGQDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNGF
HVATGSEDNTCKIWDLRKRSCIYTIPAHTSLLSDVKYQKVEGQYLVTSSYDGTAKIWSNK
TWQPLKTLPGHDGKVMSADISTDNQFIATSSFDRTFKLWAPEIV
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgtcagacgacgaggaaatttatgtaaagaagcaaaaaatagttcactatggctcattg
gaggagagtgaacgtgcaagaattgcagcagccgctgatgatggttccgacgacgataaa
gacgattcaacgccaaataaaaattcaaactcggcaatgtcagcaggaaatgtgcacatt
tccacggagtacatggaccttgaggatgaaatgtctaaagatcgtcaagcactactcgag
gaatttgaacgacgcaagaaagcgcgacaaattaatgtttcaaccgacgactcggaggtg
aagaaaaatctccgacatttgggcgagccaatttgtttatttggcgagggaccagccgag
agacgtgcaagattgagagaacttctcgctagtctcggtgaagatgcgataaaaaagaaa
cacgacgacgaggagaaaccctctcaactcgttgagaaagataccgaaacttggtatcac
gagggtcccgattctctacaaattgctcgtcaatggattgcttcatattccttgccgagg
gcgaaggcgagattagagaacgcaaggcaggaattggaacttccaggtgcaacgcgtaca
gctcgacgtcaggaattactgaagaaattgcaagcattgagtatttattgttcgcaaatt
ggcgacacgagaccgatttcctattgccagtttagtccaaattcaaaagttctcgccacg
gcgtcatggtcgggaagttgtaatttgtggtctgtaccagattgtagtcacttacgaaca
ttaaaaggtcataattgtaatgttggatgtattgtttttcatcccaaagcaacaatcgat
gacgatcttcttgccaatgaaagtgaacaaatttgtatgctggcgagttgcgcgtctgac
ggtactgttaaattatggggaggcggaacaggagagaaaccactggcagaggtcgagggt
catgaaccttttcgagtttcaaggatagcgtttcatccatccgggagatttctcggcaca
tgttgttacgattcttcatggcgactttgggacttggagcaacaagccgaagtcctacat
caggaaggccacgcgaaaccggtgcattgcatcagttttcaatgtgacggaagtgtcgtg
gcgaccggcggtcaagattcattcggcagagtatgggatttacgaaccggtaggtgtata
atgtttatggagggtcatttaaaatcgatatttggaatagacttttcgccaaatggtttt
cacgttgccactggaagtgaggataatacatgtaaaatttgggatcttcgcaaacgatcc
tgcatttacactattccagcgcacacgagtttattgtccgatgtcaagtatcaaaaagtc
gagggacaatatctagtcacaagttcatatgatggcacggcaaaaatatggtccaacaaa
acttggcagccattgaaaacattaccgggacatgatgggaaagttatgtctgcggatata
tcgacagataatcagttcatcgcaacaagttcatttgataggactttcaaattatgggca
ccggaaatagtgtag

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