Leptopilina heterotoma: 122506240
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Entry
122506240 CDS
T08438
Name
(RefSeq) collagen alpha-1(XVIII) chain
Organism
lht
Leptopilina heterotoma
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
122506240
NCBI-ProteinID:
XP_043474250
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
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MLRLPLRLPLRSLGELGEVGNACATTFLQLVLYIYIHARQNGWGKRAFCFSQLEITKVCL
NQRSYPTYIVLEGICTRSSHPYTALEDTSLMYLPGVSLKLVHDLLQASVSVLDDRFQYFE
EGLDGFPAFGFRPGSEVKQPYRIYLPEKLPAEFTLVATFKPKSTRPSYLFAVLNPFDTVV
QLGIRISDGPASNQNVSLVYTNSDEHSHSEDIVKFTVPKLTKKWSKIVIKVTTTDITLYL
NCHELGNKKVIRIPQELVFDTASTLYIAQAGPHIQGKYDGLLQTLKLYAGHPQDLVKCNA
DFDFPSGSGSGEIESIEGSGVVDFDNVFIVTDDDDDNGEGSEEFNPPPLITPPPPNVDAR
AMKGEKGDKGDKGESVRGPPGPPGPPGDGFDLNDEEFHENMPRGPPGPKGEQGECSCNAT
ALLTSFTMPKMIQGPKGEPGVLGKEGKQGQMGLTGIAGPPGERGQQGTFGQKGEKGDIGI
MGPEGPQGQKGEPGRDGIAGEKGEIGPPGPPGKGDLPTYDPDWKSRSVYRGGDAVPIRPG
LPGPKGDPGMPGNYGPKGEMGISGSKGVKGEVGHKGSKGDHGKEGHKGNQGYKGEPGAPG
VPGLPGAPGENGRPAEKGTKGDAGPEGRIGPAGPPGPPGIGGINVGDTAAGVKGEKGEIG
SFGYKGEIGLKGEKGDKGDFGPSGIPGVNGVQGPQGEKGEPGKDGIPGSFGIPGSKGDRG
ERGPPGPTTIAGSGDYITIKGEKGSEGKKGRRGKPGSQGPPGLAGPPGKPGIIGDIGLPG
HMNKGRQGTPGIPGSPGPLGPKGDKGEPASPGHYGVPIGLKGEKGDDGFPGIPGQSGRDG
QRGPPGPPGPAGPTGPMGPAPQGNYIPVPGPPGPPGPPGTPGLSFVGQKGEPGIGKSHFF
AERDYYGARQDTRFKSSLDELKALRELKQLKELKEHLGTGTVSTRGPIESTTKIVPGAVT
FQNTEAMTKMSGVSPVGTLAYIIDEEALLVRVNSGWQYIALGSLLPITTPAPPTTVPPPA
NPPFEASNLINQIPIKADGTGWYPRMLRMAALNEPFTGDMHGVRGADFTCYRQAKRAGLR
GTFRAFLSSRVQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFN
GKNILTDFAWPDKVTWHGSHTLGDRAMDTYCDAWHSSSSDRFGLGSPLTGGRLLEQIRYS
CDKKFALLCIEVTSEIARRRKRSDDLFEFDYDDELSEFEYQKHLEQVMNN
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgctgagactgccactcagacttccccttaggtctctgggtgaattaggcgaagttggc
aacgcgtgtgcgacaacatttttacaacttgtcctttatatttatatacacgcgaggcaa
aatggatggggaaaaagggctttttgcttctctcaacttgaaatcacaaaagtctgccta
aatcaacgatcctatccaacatatatagtccttgaggggatttgcacaagatcctcgcac
ccttatactgcacttgaggacacgagtcttatgtacctacctggtgtttcgttaaaattg
gtacatgacttgcttcaagcatctgtctcagttctcgatgacagatttcaatatttcgag
gagggcttggacggttttccagccttcggatttcgtcctggttccgaagtcaagcaacca
tacagaatttaccttcctgagaaacttccggccgaattcacattggttgcgacttttaag
cccaagtcaactaggccaagttatctttttgcagttctcaatcccttcgatactgtcgtt
cagcttggcatacgtatttcggatggaccagcatccaatcaaaatgtgtccctcgtctac
acaaattcagatgaacactcacattccgaagatatcgttaagtttactgtgccaaaatta
acgaagaaatggtcgaaaattgtcatcaaagtaacaacaaccgacatcacactctatctc
aattgtcatgaattggggaataaaaaagtcatcaggataccgcaggaattggttttcgac
actgcaagcacactctacattgcccaggctggaccgcatatccagggaaaatacgatggt
cttctacaaactttaaaactctacgctggacatcctcaggatctcgtcaagtgtaatgcc
gattttgattttccttcgggctctggctcgggtgaaatcgaatcaattgaaggttcagga
gtggttgattttgacaacgtattcattgtaactgatgatgatgatgataatggtgaggga
agcgaggaatttaatccaccaccgttaattacaccaccgccaccaaatgtcgacgctcgc
gctatgaaaggtgaaaagggtgacaaaggagacaagggtgagagtgtgagaggaccaccg
ggaccaccaggtcctccaggagatggcttcgaccttaatgacgaggaattccacgagaat
atgccgagaggaccgccaggaccaaagggagagcaaggtgaatgcagctgtaacgcgacg
gcattgctcacatccttcacgatgccgaaaatgattcaaggtcctaagggagagcccgga
gtccttggaaaagaaggaaaacagggacaaatgggactcacgggtatagctggaccgcca
ggtgaaagaggacagcaaggtacttttggtcagaagggtgagaaaggcgatattggaata
atgggaccagaaggacctcagggtcaaaagggtgagcccggaagagatggaattgcgggc
gaaaaaggcgagataggaccgccaggtcctcctggcaaaggggatttacccacttacgat
cctgattggaaatctcgcagtgtatacagggggggcgatgctgtgccaataagaccggga
ttaccaggaccaaagggcgatccaggaatgccgggaaattatggaccaaaaggcgaaatg
ggaatttcgggaagtaagggcgtaaagggtgaggttggtcataagggctcgaagggcgat
catggcaaggagggacataaaggaaatcaaggctataagggcgaacctggtgcaccaggt
gttcctggattaccgggagctcctggagaaaatggaagaccagctgaaaaaggcaccaag
ggtgacgctggtccagagggaagaatcggccctgctggaccaccaggacctcctggaatt
ggtggcattaatgttggcgacaccgctgctggtgtcaaaggagagaaaggagagatagga
agttttggttacaaaggtgaaattggattgaagggtgagaaaggtgataaaggagatttc
ggaccttctggaattccaggagtgaatggagttcaaggaccccagggcgaaaagggcgaa
ccgggaaaggatggaattcctggttcattcgggattccgggatcgaaaggtgataggggc
gagagaggtccaccaggtccaacgacaattgctggctctggtgattatattacaattaaa
ggtgaaaaaggctccgaaggtaaaaaaggaaggaggggaaagcctggaagtcaaggaccg
ccgggtttagcgggacctccgggaaagcctggaattatcggtgacatcggtctaccgggt
cacatgaataagggtagacaaggaactcctggtataccaggaagtccaggtcccttggga
ccgaaaggtgataaaggagaacctgcttcaccaggtcattatggagttcctattggcttg
aaaggcgagaagggagacgatggatttcctggaattcctggtcaatctggtagagatggg
cagaggggtcctccgggaccgccaggacctgctggtcccactggcccaatggggccagct
ccccaaggaaattatattccagttccaggacctccaggacctccgggtcctcctggtact
cctggtctttcatttgtcggtcagaagggagagccgggaataggcaagagccatttcttt
gctgaacgagattattatggtgcacgacaagatacaagatttaaaagtagtttggatgaa
ttaaaagctttgagggaattgaaacaactcaaagaattaaaagaacatttaggtacgggc
acggtctcaacaagaggtccaatagaaagcacaacgaaaatagtaccgggagctgtgaca
ttccaaaatacggaagccatgacaaaaatgtctggtgttagtcctgtaggaacattagct
tacattattgatgaagaggctttattagttagggtgaatagtggttggcaatatatcgct
cttggttctcttctacctatcacaacgccagcacctccgacaaccgttccaccacctgca
aatccaccatttgaagcgtcaaatcttatcaatcaaattccaataaaagctgacggaaca
ggatggtatccacgaatgctacgaatggcagctttaaatgagccttttactggagatatg
catggggttcgtggagctgatttcacttgttatcgacaagcaaaacgagcaggcttaaga
ggcactttccgtgcttttcttagctcgagagttcagaatgttgacagtatagttagacta
ggcgatagagatctccccattgtaaatatcaagggagacgttcttttcaactcatggaag
gaaatgtttaacggaaatggagcctatttctcccagaatccacgaatttacagcttcaat
ggaaaaaatattctcaccgatttcgcctggccggacaaagtgacttggcacggttctcat
acactcggtgatcgtgcaatggacacctactgcgacgcttggcactcgagtagctccgat
cgtttcggtcttggatctccattaactggtggacgtttactggaacaaattcgttactcg
tgtgacaaaaaattcgcactgctctgcatagaagtcaccagtgaaattgcgcggcgacga
aaacgttccgacgatctctttgaatttgactatgatgacgaactatcggaatttgaatat
caaaaacatttagagcaagttatgaacaattga
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