Leptopilina heterotoma: 122507977
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Entry
122507977 CDS
T08438
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
lht
Leptopilina heterotoma
Pathway
lht04120
Ubiquitin mediated proteolysis
lht04137
Mitophagy - animal
lht04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122507977
04120 Ubiquitin mediated proteolysis
122507977
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122507977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lht04131
]
122507977
04121 Ubiquitin system [BR:
lht04121
]
122507977
03029 Mitochondrial biogenesis [BR:
lht03029
]
122507977
Enzymes [BR:
lht01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122507977
Membrane trafficking [BR:
lht04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122507977
Aggrephagy
Other aggrephagy associated proteins
122507977
Xenophagy
Other xenophagy associated proteins
122507977
Ubiquitin system [BR:
lht04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122507977
Mitochondrial biogenesis [BR:
lht03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122507977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
Dsc3_N
HI0933_like_1st
MamS_MamX
Motif
Other DBs
NCBI-GeneID:
122507977
NCBI-ProteinID:
XP_043476947
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MSFLFDLIRSVFLRMLELIWSSKTRISNTLSIYVKTNTGKTVHIDLNPKWDIKNVKEIVA
KKLDMPAEELKIIFAGKELHNSTIIEECDLGQQSVLHAVRTHHKVKKINKTTIEESISEN
SEYNDSGSKPLNETLSDLPLDESSELESTSEEQKNRAHFYIYCSAPCKSVEAGKLRVRCA
TCKHGAVTVDRDPQCWPDVLLPQRITVHCENEFCQFSISPNDEIESQVHYAQFYFKCAKH
PSLGETDEAVPLYLVKPNLAKIPCLACTDIRETVLVFPCEAGHVTCLDCFRDYCSSRLRE
RQFQFDDTRGYYTLPCPAGCPNSFIPEIHHFHLLPSQQYEQYQRFGTEEYVLREGGILCP
QPDCGMGIIPPKVENGYTEEDCRKVQCIGGCGFVFCKKCLQGYHVGDCEPQAQSYGNSSF
GSGYVVDPLKAKDAKWEEASKKTIKISTKPCPKCRTPTERDGGCMHMVCTRAGCGYQWCW
VCQTTWTRDCMGNHWFG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagttttttattcgatctaattagaagtgtttttttaagaatgttagaattaatttgg
tcaagtaaaacccgtatttcaaatactctaagtatttacgtgaagacaaacactggaaaa
actgtgcacattgatttaaatccaaaatgggacatcaagaatgtcaaggaaattgttgcc
aaaaaattggacatgcctgcagaggagttaaaaattattttcgccggtaaagaacttcac
aattcaacaataattgaggaatgcgatttgggacaacaaagtgttttacatgcagttcga
actcatcataaagttaaaaaaattaataaaaccacaatagaggaatcaatatcagaaaat
tcggaatataatgacagtggaagtaaacctctcaatgaaactttgtccgatttacccttg
gacgaatccagtgaattagaatcgacttcggaagaacaaaaaaatcgagcgcacttttat
atttattgctcggctccatgcaaatctgttgaggctggaaaattgcgagttagatgtgca
acttgtaaacatggtgcagtcactgtcgatagagatccacaatgttggccagatgtctta
ctgccgcaaagaataacagttcattgtgaaaatgaattttgtcaattctccatttcaccg
aatgacgagattgaatcgcaagttcattatgcacaattttatttcaagtgcgcaaaacat
cccagtttgggagaaactgacgaagcagtgcctttatatctcgtgaaaccgaatttagcg
aaaattccctgcctcgcttgcactgacattagagaaactgtattggtttttccatgtgaa
gcgggtcatgtcacttgcttggattgctttcgtgattattgttcgtcgagattacgcgaa
aggcaatttcaatttgacgacacacgtggatattacactttaccttgtcctgctggttgt
ccaaattcatttattcccgaaattcaccattttcatcttctaccctcacagcaatacgaa
caatatcaacgttttggtacagaagaatatgttcttcgtgagggaggaattttatgtccg
cagcccgattgtggaatgggaataataccaccaaaagttgaaaatggatatacggaggaa
gattgtcgtaaagtgcaatgcatcggtggttgtggattcgtattctgcaaaaaatgttta
caaggatatcatgttggcgattgtgaacctcaggctcaatcttatggcaattcgagcttt
ggatctggatacgttgtagatcctttaaaagcaaaggatgcaaaatgggaagaagcaagt
aaaaagacgataaaaatttccacaaagccgtgtcctaaatgccgaacaccaacagaaaga
gatggaggatgtatgcacatggtgtgtacaagagctggttgtggataccagtggtgttgg
gtgtgccaaaccacttggacaagagactgtatgggcaatcactggtttggttaa
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