Leptopilina heterotoma: 122508020
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Entry
122508020 CDS
T08438
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122508020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122508020
03012 Translation factors [BR:
lht03012
]
122508020
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122508020
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122508020
Translation factors [BR:
lht03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122508020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
AAA_22
ResIII
nSTAND3
AAA_14
AAA_19
ATPase
AAA_7
AAA_23
T2SSE
NPHP3_N
PhoH
Sigma54_activat
ATPase_2
NACHT
AAA_16
SRP54
NB-ARC
AAA_34
TsaE
Rad17
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122508020
NCBI-ProteinID:
XP_043477025
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MSGTKMFNSFSSSRGYGRGGRGGRGGGGRGRGGHPPGLSGKEIGLYYRDKARHSAKKRED
EAKILRLNPNTERRITSLIDFRKIPDNLFNRESNRTNVASSFNDQENKYENMYMHINDSQ
FKRKFLNIVTGNIQENLMNSLRTSSKLKRNQAIDERFYQDYQKMINTKEYLNMLNFRKLL
PAFNRREEILDLLKHNQVILISGETGCGKTTQVAQFILDNELLKKNGSITKIVCTQPRRI
SAISVAERVAAERGESLGNSVGYQIRLERILSRQEGCIMFCTTGMLLQFMQGDPALTDIS
HIILDEIHERNTQSDFIIALLKQVIPKRPDLKVILMSATLNSDKFSKYYGDCPKMHIPGF
TFPVEEFYLEDAILFTRFQFPDDTRNVGAQKHYKKFMKKHKFQDKDDQYLDFIGPYVRHL
QSQRKYPQFVIDQLRNPKCEDLSLELIEQLVAYICSTQPPGAILIFLPGVMDITKLHRLI
TESHRYPRDRYIVYPLHSRMPTVDQKLIFDVPPSGVRKIIISTSIAETSITIEDVVYVID
CGKTKLSRFDVENNIQTLLPEWETIANAQQRRGRAGRVKPGICFHLYTRARENTFDHYPL
PEMLRSRLEEVILQIKILQLGRSSNFLASVMDPPDSKAIDISLDLLRQLNALDDNERLTP
LGYHLAQLPLDPRTGKMIIWASLFSCIEPIFSIAASLSFKDAFYCPINREEEARNKKIEL
GMGQFSDHIALAEALKRFESNNHRWHQSASFCREYFLSRNTLQLLSDMKCQFARYLHEMK
FLQNENVRDSNANRNSNNLSLIKAIICAGLYPNIAIVKGVTKHNVKVSTPEDGKVKIHPS
SINEKVRSMPSCYLIYFFKKRSTAIYLHDTTFVSAWALLFANFNKLSETLGNRSVVTVTN
TLKFSCDSSTARIIQKLREQLEGLLEHKITHPGTVDWKGQEGRIVNAIIELLSQGEEDMG
LESGKYHQLDENEIDDDSD
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggaccaaaatgttcaatagtttttcttcatcgagaggatatggtcgaggaggc
cgtggtggtcgaggtggcggtggacgaggacgaggaggtcatcctcctggtttaagtgga
aaagaaattggtctctattatagggacaaggcgagacacagtgctaaaaaaagagaagat
gaagctaaaattcttcgattaaatccaaacaccgaaagacgaattacatcgttaattgat
tttcgaaaaattcccgataatctatttaatcgagaatcaaatagaacaaatgttgcgtca
tcattcaacgatcaggaaaataaatacgaaaatatgtacatgcacataaatgattctcaa
tttaagcggaaatttttgaatatcgtcactggaaatatacaggaaaatctcatgaattct
ttacgtacgagttcgaaattaaaaagaaatcaagccattgatgaaagattctatcaagat
tatcaaaaaatgataaatacaaaggagtatttgaatatgttgaattttcgtaaactactt
cctgcgtttaatagacgggaggaaatattagatcttttgaaacataatcaagtcatactg
atcagcggtgaaacaggatgtggtaaaacgactcaagtagcgcaattcatactcgataat
gaattgttgaagaaaaatggcagtattacgaaaatagtttgtactcaaccaagacgaata
agtgccatatcagttgccgagagagttgcagccgaaagaggcgaatcactgggtaattca
gttggttatcaaattcgtctcgaaagaattcttagtcgacaggaaggctgtataatgttt
tgcacaactggaatgttgttacaatttatgcaaggcgatcctgctttaacggatatttcg
catatcattttagacgaaattcacgaacgcaacacgcaaagtgattttatcattgcgtta
ctcaaacaagtgattccaaagaggccagacttgaaagtaattctcatgagtgcaacacta
aatagtgacaaattttccaaatattatggcgactgtccgaaaatgcatattccaggattt
acgttccccgtggaagagttttatctggaggacgcgatattatttacacgatttcaattt
ccagacgatacaagaaacgtcggggcgcaaaagcattataagaagtttatgaaaaaacat
aaatttcaagacaaagacgatcagtacttggattttataggaccttatgtgcgtcatcta
caatctcagagaaaatatccacaattcgtaattgatcaattgcgcaatccaaaatgtgaa
gatttgtcacttgaacttatagaacaattagtcgcttatatttgctctacacaaccacct
ggtgctatactcatttttcttcctggcgtaatggatattacaaaattacatagactaata
acggagagtcaccgatatccaagagatagatatattgtgtatccgctacattcccgaatg
ccgacagtcgaccaaaagttaatattcgatgtaccaccgtccggagtacggaaaataatc
atatcaacctcgatagcagagacatcgataacaatcgaagatgttgtttacgttattgat
tgtggaaagacgaaactctctcgattcgatgtggaaaataatattcaaaccctattgccc
gaatgggaaacaatcgcaaatgcacaacaaagacgtggacgagccggaagagtgaaaccc
ggtatttgttttcatctctacacgagagctagggaaaatacattcgatcattatccatta
ccggaaatgttacgctcacgactagaggaagttatattgcaaattaaaatattacaatta
ggaagatcgagtaatttcctagccagcgttatggatcctcctgattctaaagccattgat
atctctctcgatttattgagacaacttaatgctctcgatgataatgagcgtctaacacct
cttggttatcatttggcgcaattacctctggatccaagaacaggtaaaatgataatttgg
gcttcacttttctcgtgcatcgagccaatattttcgatagctgccagtctgtcttttaaa
gacgcattttattgtccaattaatagagaggaggaggcgcgaaataaaaaaattgaactt
ggaatgggacaatttagcgatcacattgcacttgccgaggcgctcaaacgttttgaatca
aataatcatcgttggcatcagagtgcatcattttgtcgggaatattttctatcgcgtaat
acacttcaattattatcggacatgaagtgtcagtttgctcgttatttacacgaaatgaaa
tttcttcagaatgaaaatgtacgtgacagtaatgccaatagaaattctaataatttgtca
cttataaaggcaattatctgcgctggactctatccaaacattgcgattgtcaaaggtgtt
acaaaacataatgtgaaagtgtccacacctgaagatggaaaagtgaagatacatccttcg
agtataaacgaaaaggttcgaagcatgcccagttgttatttaatttacttctttaaaaaa
cgatcgactgcaatttatttacacgatacaacatttgtcagtgcgtgggctttactattc
gccaattttaataaactctcagagacccttggaaatagaagtgtcgtgactgtcacgaat
actttaaaattctcctgtgattccagcacagccagaattattcaaaaattgcgcgaacaa
ttggaaggacttttggagcataaaataacccatccaggaactgttgattggaagggacaa
gagggacgaattgtcaatgcaattatagaacttttgtcacaaggcgaagaagacatgggt
ttagagtcaggaaaatatcatcaacttgatgaaaatgaaatcgatgatgattctgattag
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integrated database retrieval system
