KEGG   Leptopilina heterotoma: 122508058
Entry
122508058         CDS       T08438                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
lht  Leptopilina heterotoma
Pathway
lht03030  DNA replication
lht03410  Base excision repair
lht03420  Nucleotide excision repair
lht03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122508058
   03410 Base excision repair
    122508058
   03420 Nucleotide excision repair
    122508058
   03430 Mismatch repair
    122508058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lht03032]
    122508058
   03036 Chromosome and associated proteins [BR:lht03036]
    122508058
   03400 DNA repair and recombination proteins [BR:lht03400]
    122508058
DNA replication proteins [BR:lht03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122508058
  DNA Replication Termination Factors
   ELG1-RFC complex
    122508058
Chromosome and associated proteins [BR:lht03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122508058
DNA repair and recombination proteins [BR:lht03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122508058
  Check point factors
   HRAD17(Rad24)-RFC complex
    122508058
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_22 Mg_chelatase AAA_24 AAA_11 AAA_30 AAA_19 DUF815 ATPase_2 bpMoxR AAA_assoc_2 Rad17 AAA_14 SLFN-g3_helicase Gp44_lid AAA_5 ResIII RuvB_N nSTAND3 AAA_7 AAA_18 AAA_3 DNAX_ATPase_lid AAA_28 AAA_23 AAA_25
Other DBs
NCBI-GeneID: 122508058
NCBI-ProteinID: XP_043477080
LinkDB
Position
Unknown
AA seq 356 aa
MHAFLKTGKLGPGEVKKPSTSRTKERGGPSPPWVEKYRPKTVDDVVEQAEVVQVLRQCLA
GGDFPNLLLYGPPGTGKTSTILAAARQLFGDMYKDRILELNASDERGIQVIRDKVKTFAQ
RTASSVRNDGKACPPFKIIILDEADSMTVAAQSALRRTMEKESHSTRFCLICNYVSRIIE
PLTSRCTKFRFKSLGEEKIIERLEFICGEEDLKAEKAVLVKLVEASGGDLRRAITSLQSV
MRLKGKGVDVTIDDVLEVTGVVPDYWLHDLMEVCKDQNYTKTEEFIEKFMMEAYSTTQVI
DQLNERIIYSNHLTDKQKAHIGDRLGECSYRLLDGGSEYVQLITLCCGIMQAYEMS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcacgcttttttaaaaaccggaaaattgggtcctggagaggtgaaaaaaccttcgaca
tctcgcacaaaagaacgtggtggtccatcgcctccttgggttgaaaaatatcgtcctaaa
actgtagacgacgtagtcgaacaggcagaagtcgtccaggttcttcgtcaatgtttagct
ggaggtgattttccaaatttactactttacggtccaccgggaacgggaaaaacgagtaca
attttggcagctgcccgacaactttttggcgatatgtacaaagacagaattttggagttg
aacgcctctgatgaacgtggtattcaagtgattcgcgataaagtcaaaacattcgcacaa
cgcacagccagcagtgtaagaaatgacggaaaggcgtgtccaccttttaaaataataatt
ctggacgaggcggacagtatgactgttgctgctcaatcggccctacgtcgaacaatggaa
aaagaatctcacagtacacgtttctgtttgatttgcaattacgtttcacgtattattgaa
ccattaacgtcacgttgtacaaaattcagattcaaatctttgggcgaggagaaaattatc
gagagattggaatttatttgcggtgaggaggatttgaaagctgaaaaagcagttctcgtt
aaattagttgaagcttccggtggagatttaagaagggcaatcacttcattgcaatcggtt
atgagactcaagggaaagggtgtcgatgtcactattgatgatgttttggaagtcactgga
gttgttcccgattactggttgcatgatttaatggaagtctgtaaagatcaaaattatacc
aaaacagaagagtttatcgaaaaatttatgatggaagcttattcaacaactcaggtgata
gatcaattgaatgaaaggattatttactcgaatcatttaacggacaaacaaaaggcccat
attggcgatagacttggggaatgtagctacagattgctggatggaggcagcgaatatgta
caattaataactttatgctgcggtattatgcaagcatacgaaatgtcataa

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