Leptopilina heterotoma: 122510161
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Entry
122510161 CDS
T08438
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
lht
Leptopilina heterotoma
Pathway
lht03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122510161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lht03009
]
122510161
Ribosome biogenesis [BR:
lht03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122510161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_EMC1_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_WDR41
Beta-prop_RIG_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122510161
NCBI-ProteinID:
XP_043480548
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MSTCRIHNVRFYNLEPKAVTCLCYGQDNKKLALSRDDNTIEIWHVENAPFILATIPGNAD
YSIEAILWIGSRLFSTGLRGMIVEYDLIKLASKYEVAVTGGAAWCMDVNRSKTRMAIGTE
DGYINTFFITPDSLLYERIFDKQKGRILCLKWDNSGDMIFTGSSDTVRVWNSTTGHAIHK
MTTSRKEAKKETIVWCLEVTDENTIVSGDSRGVICIWDPNIGTLIESYESHTADILALTM
SNDMNMFYCAGVDPVIRIFSKVISKGRTQWVRGTERRLHVHDVRAVIEANGKLYSAGVDG
YLAQSSYPPKFLVKYPPLLQPPCVTVCKKSRCILLRYSNFLELWRLGESKISDFVPVGTL
HQLTEEPVKLLTLKTKDDENIVTCAVNKTSKIIVYSTDSHLRIFNFDVVDGNASLCRNDT
DIPLNKVQKILFSPDSKRIVTIDNDGKNTVRFYDIEKKSRLRYFGEFQTDSEFIHRVGLV
CFSPDKKYLICNDESRIVIYHVDGDLTRESLKPWSLPKYSCPVTAMAVQEDTLNLVVVYA
DHKIIEYSISSRKYTEFSKSLQDCLPLQWLSRPFPITNIIFSPKNENVIIMHDDTSVFVL
NKKNELPNNKVKIAKLENGDSRDDSNSGLGTQSHHMFQIVKKYKHLVHLDWLNDEEMVAV
EVNPISLTEKLPPTLKQKSFGM
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttgtagaattcataacgttagattttataatctagaaccaaaagcggtaaca
tgtttgtgttacggacaggacaacaagaagttggcactttcgagggatgacaacaccatt
gaaatatggcacgtggagaatgctcctttcattttagcgacaattccaggcaatgcggat
tattcgatagaagcaattctttggattggctcacgtctcttttccactggtcttcgtgga
atgattgttgaatatgatttaataaaattagcctcaaaatacgaagtggcagtgactgga
ggtgctgcatggtgtatggacgttaatcgcagtaaaacacgtatggcaatcggtacagag
gacggttatataaatacatttttcataacacccgattctctgctttacgagagaattttc
gataagcaaaaaggaagaattctctgtttaaaatgggacaattccggtgacatgatattc
acgggatcatccgatacagtaagagtttggaattcgacaactggtcatgcaattcataaa
atgacgacatcacgaaaagaggcgaagaaggaaacaattgtttggtgcttagaagtgacg
gacgaaaatacaattgtctcgggtgattcacgaggggtaatttgtatctgggatccaaat
attggaacattaattgaatcgtacgagagtcatacggccgatattttggctttgacgatg
tcgaatgatatgaacatgttttattgtgcgggtgtcgatccagttattagaattttctca
aaagtcatttctaaaggtcgaacacaatgggtacgtggcactgagcgacgattacacgta
cacgacgttcgtgccgtaattgaagctaatggaaaattatattcagccggtgttgatggt
tatttggcccaatcgagttatccaccgaaatttctcgtcaaataccccccattattacaa
ccaccctgtgttactgtttgcaaaaaatcacgttgcattctcttgagatatagtaatttt
ctcgaattatggcgattaggtgaaagtaaaatatcagattttgttccagttggtacttta
catcaattgacagaagaaccggttaaattactcacattgaaaacgaaggacgatgagaat
attgtcacgtgtgctgttaataagacatcgaaaattattgtctactcaactgatagtcat
ttgagaatttttaatttcgacgttgttgatggtaatgcaagtctatgcaggaatgatacg
gatattcctttgaataaagtacagaaaattctcttcagtcccgattcgaaacgaattgta
actattgataacgatgggaaaaatacagtgagattttatgacattgaaaaaaagagtaga
ctgagatatttcggtgaatttcaaactgatagtgaatttattcatcgtgtgggattagtc
tgcttctcaccggataaaaaatatctcatttgcaatgatgagagtcgaattgtcatttat
catgtcgacggggatcttaccagagaatcacttaaaccctggtcattacccaagtacagt
tgtcctgtcactgcaatggctgttcaggaagatactctcaatttagtcgttgtttacgcc
gatcacaagattattgaatacagtatttcatctcgaaaatatacggaattttccaagagt
ttacaagattgtctacctctacagtggctttcgaggccctttccaattacaaatataatt
ttcagtcctaaaaatgaaaatgtcataataatgcacgacgacacttcagtttttgttctt
aacaaaaagaacgaattgcccaacaataaggtgaaaattgcaaaattagaaaatggtgat
tcacgtgacgattcgaattctggtcttggtacacaatcccatcacatgtttcaaatcgtt
aaaaaatataagcatttggtgcacttggattggttgaacgacgaagagatggtagcagtg
gaagttaatccaatatcattaactgaaaaattgccaccaacattaaagcaaaagagcttt
ggaatgtaa
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