Leptopilina heterotoma: 122510376
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Entry
122510376 CDS
T08438
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
lht
Leptopilina heterotoma
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lht03021
]
122510376
03036 Chromosome and associated proteins [BR:
lht03036
]
122510376
Transcription machinery [BR:
lht03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122510376
Chromosome and associated proteins [BR:
lht03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122510376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
S1
Tex_central_region
HHH_9
HTH_10
Tex_YqgF
HHH_3
Tex_N
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
122510376
NCBI-ProteinID:
XP_043480907
LinkDB
All DBs
Position
Unknown
AA seq
1873 aa
AA seq
DB search
MADFLHSEAEESDDEDELDPTERKKLKKLKAMEESDEEDEDDEDRLREELKDLIDDNPIE
EDDSDGEDSDGSKKRKKSDEEDFDDRLEDDDYDLIEENLGVKVERKRFKRLRKIEDEESE
EEQEHEVEEERDAIANQLFEGSGDERDVLEDERSERSHRPEIETFDEEGSEGEYSEDDFI
VDDDGRPIAEKRKKKKHIFSDAALQEAQDIFGVDFDYDEFDKYGEEDYEEEEDEEEDDYV
DEEADIDKPKRPKKQLKKKTTKKSIFEIYEPCELKRGHFTDLDNEVRTTDIPERIQLRSV
PMTPVPEGSDELDLEAKWIYEQAFHRPTISVQDSHLNAEAKERANKPPHTIEKIKKALDF
MRNQYFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFEKMKNFQL
EEIMKNPDAPLPENLRVIKDEDVERLKNAQTSEELNDIYHHFILYYNHEIPVMQEAVRQK
EREARKEAKRQKRKQLILEAEENGEEAPPEEDEEEEEEDNSDEILKKAARTGPYEICRKA
GLESLAKKFGLSPENFAENLRDNYQRHEVDQEPMEPIGLAEEFIGQKFKNSDEVLKAAQL
MVAFQLAREPLVRKCVRDIYMERAKISIRPTKKGMKEIDENHPIFSMKYLKNKPVRDLIG
DHFLKLIIAEEDKLITISFSNSIEGNTSANFIEEMKQLYYRDEFSKNVQDWNALRVGSVE
MALMKMVIPDLKKELRANLLAEAKECVMRSCCRKMYNWLKVSPYTCEFPEEDDEEWDTSR
GLRVMGLSYVPDYSQSAFACIISPDGECTDHLRLPHLLKRKNSFRRDEKVMKEADLLAIR
NFIATKKPQLIVIGGESREALMIQADVKEIITNLVEEEQFPAVQVEICENDLAKIYANSN
KGIAEFRDYPELLRQAISLSRRMQDPLVEFSQLCTADEEILCLKFHPLQDQLLQDELLEN
IYLEFVNRVNEVGVDISKAVQQAYCGNLVQFVCGLGQRKGQALIKILKQTNQRLENRTQL
VTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYD
DEDANPAGALEEILESPEKLKDLDLDAFAEELERQGFGNKRVTLYDIRAELNSRYKDLRV
VYQSPNPEKLFDMLTKETLETFYEGKLILATVVGISRRKPQGDQLDQANPVRNDETGLWQ
CPFCLKNDFPELSEVWNHFDAGSCPGKAIGIRLRLDNGISGYIHIKNLSDKHVANPEERV
GLGQIIHCRIIKIEVEKFGVECTSKSSDLSDKKNEFRPQKDPFYDTDSEEKDRQVEEDAK
KVKQRQTYVKRVIVHPSFHNISFSESEKLLQSMKQGDAIIRPSSKGADHLTVTWKVTDGV
HQHIDVREEGKENAFSLGHRLWIGGEEFEDLDEILARHINPMAAYASELLEFKYYKASVN
GIKDKAEELLKTQKKENPGGIPYIISAAKNIPGKFLLSYLPRVQCRHEYVTVSPEGFRFR
GQMFSKVADLLKWFKEHFRDPLPGQATPSTPRGMMSTRTPYHTPGGVNQEAIQRVAQNMP
QHILSSLSQVANQKMYQPHTPGAAGYSGIHTYPNTPYTPSGQTPFQAMTPYRTPQTPFLQ
PAPVSIQPIHHSSPSLSRPTPPPSNAPSGNNMDWKKAAMAWARQAGSNKSSGNTPRFDED
RRTPRRYENEDNRHFDMGDNTFTKGLSRDNTPKQSFDDNNSFSSRDKTPTYSSSGSFRGK
SPSYSMNQRGKSPSLSSTSRGKSPSYSRNKSPKYKQSPRSRGGGGGGGGKFNANTSRDKS
PSYDDNPFTIGSSRDRQRDDDQEKDDNPFTIGSTREKMRTPSYKSPRNSTPFTNSSPRSM
SLSGDGTPLYDES
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttttacattcagaagcagaagagagtgatgatgaggatgaattggatcca
acggagaggaagaaacttaaaaaacttaaggcaatggaagagagcgatgaggaagacgaa
gacgatgaagatcgtttgagagaagaattaaaagatttgattgatgacaatccaatcgag
gaagacgacagtgacggagaggacagcgatggttcgaaaaagcgcaaaaaaagtgacgag
gaagattttgatgatcgtcttgaagatgatgattatgatctcattgaggaaaatcttggc
gttaaagtcgagaggaaacgattcaaacgtcttcgaaaaattgaagacgaagaatctgaa
gaagaacaggaacacgaagtggaagaagagagagacgcaattgcaaatcaattattcgaa
ggttcaggagatgaacgtgacgtactggaggacgaaaggagtgaaagaagtcatagaccg
gaaatagaaacttttgatgaggaaggtagtgagggagaatattcagaagacgattttatt
gtcgatgatgacggtcgaccaatagctgagaaaaggaagaagaaaaaacatatcttttca
gatgcagctcttcaagaggcgcaggatatttttggtgttgatttcgattacgacgagttt
gacaaatacggagaagaagattacgaggaggaagaagacgaagaggaagatgattacgtt
gatgaagaggctgatattgacaaacccaagagaccgaagaaacaactgaaaaagaagact
acgaaaaagagtatttttgaaatttacgaaccctgcgaactcaagcgtggacatttcacg
gatcttgacaacgaagttcgaacaacagacataccagagagaatacaacttcgttcagtg
ccaatgacaccagtgccggaaggttccgatgaattggatctcgaggcaaaatggatttac
gaacaagcatttcatcggccaacaatttcagttcaagattcgcatttgaatgccgaagca
aaagagagagccaacaaaccaccgcatacaatagaaaagatcaaaaaggccctggacttt
atgcgaaatcaatatttcgaagtgccttttatttccttctatcgtaaagaatacgttttg
cctgaattgaatataaacgatttgtggaaagtttataaattcgatgcaaaatggtgtcaa
cttcgtcaacgaaaggaaaatcttttgaaactttttgaaaaaatgaaaaatttccaactt
gaggaaataatgaaaaatcccgatgcaccattgccggaaaatctgcgagttattaaagac
gaggacgttgaacgattgaaaaatgcacaaacaagtgaagagctcaatgatatttatcat
cattttattttatattacaatcatgaaattccggtgatgcaggaagcagtgaggcagaag
gagagagaggcaagaaaagaggcgaaacgacaaaaacgtaagcaattgatacttgaggct
gaggaaaatggtgaggaagcaccgcctgaggaagatgaggaggaggaagaggaggataat
tctgatgagattttgaaaaaagccgctcgcactggtccttatgagatttgtcgtaaagct
ggattggaaagtttggcgaaaaaatttggactttcgccggagaattttgctgaaaattta
cgagacaattatcaacgacacgaagtcgatcaagaaccaatggaaccaattggtcttgcc
gaagaatttattggtcagaaatttaagaattccgacgaagttttaaaagccgcacaatta
atggtggcatttcaattggcgcgcgaaccacttgtgcgaaaatgtgtgcgcgacatttat
atggagagagcaaaaatatcaatacgaccaacaaagaagggaatgaaggaaatcgatgag
aatcatccaattttctcgatgaaatatctgaaaaataaacccgtacgcgatctgattggt
gatcattttttaaaattaattatcgccgaggaagataagctgattaccatttcattcagt
aattccattgagggcaatacgagcgcaaattttattgaggaaatgaaacaactttattat
agagatgagttcagtaaaaatgttcaagactggaatgcactacgagttggcagtgtggaa
atggctcttatgaaaatggtgatcccggacctaaagaaggaattacgtgcaaatttgctc
gccgaggcaaaagaatgcgtgatgagatcgtgctgtcgaaaaatgtacaactggctgaaa
gtatcaccctacacttgtgaatttcccgaagaagatgacgaggaatgggacacaagtcga
ggattacgtgttatgggactctcctacgttcccgattattcacaatcggcatttgcttgc
attatctcaccggatggcgagtgtaccgatcatctacgtcttcctcatcttctcaagcgg
aaaaatagtttccgccgcgacgagaaagtcatgaaggaggcagatctattggcaattcga
aattttatcgccaccaagaaaccacagttaattgtcattggtggcgagtcgagggaggct
ttaatgattcaagctgatgttaaggaaattatcacaaatctcgttgaggaagaacaattt
cccgctgttcaggtggaaatctgcgagaatgatttggcgaaaatttacgcaaatagtaat
aaaggaatcgctgagtttcgtgattatcccgaactattgagacaggcaatttcattgtcg
cgaagaatgcaggatccattggtggaattttcgcaattatgcaccgctgatgaggagata
ctttgtctcaagtttcatccattgcaggatcaattgcttcaggatgagttgttggagaat
atttatcttgaatttgtgaatcgtgtgaatgaagttggagtggatattagcaaagctgtg
caacaggcgtactgtgggaatttggtgcaatttgtctgcgggctgggtcagagaaaggga
caggctttgattaaaattttgaagcagacgaatcagagattggagaatagaacgcaattg
gtcactgcttgtcatatgggaccaaaggtgtttattaattgcgcgggatttattaaaatt
gatacaaatagtcttggtgatagtacggaggcttatgttgaggttctcgatggatcgaga
gttcatccggagacttatgagtgggcgaggaaaatggcggtcgatgcgctcgagtacgac
gacgaggatgcgaatccagcgggagctttggaggagattttggagtcgccggagaaattg
aaggacttggatctcgatgcatttgcggaggaattagagagacagggttttggaaataaa
cgtgtgacactttatgatatcagagcggaattgaatagtcgatacaaggatctaagagtt
gtttatcaatcgccgaatccggagaaactcttcgatatgctcaccaaggagacgctggaa
acattctacgaggggaaattgattttagcgactgtcgttgggattagtcgtagaaaacca
caaggagatcaactcgatcaggcgaatccggtgaggaatgacgagacagggctctggcag
tgtccgttttgtttgaagaacgattttcccgaattgtccgaggtgtggaatcattttgac
gctggatcttgtcctggcaaagcaattggaattcgactgcgattggacaatggaatttcg
ggctatattcatattaaaaatctgtctgataagcacgtcgccaatccggaggagagagtt
ggactggggcagattattcactgtagaattatcaaaattgaagtggaaaaattcggtgtt
gagtgcacgagtaaaagcagcgatctttcggataaaaagaatgaattcaggcctcagaag
gatcctttttatgacaccgattctgaggagaaagatcgtcaggtcgaggaggacgcgaaa
aaagtgaaacaacgacaaacttacgtgaagcgcgttattgttcatccatcttttcacaat
attagtttctcggaatcggagaaacttttgcagagtatgaagcagggagacgcgattatc
agaccgagtagcaaaggtgctgatcatttgacagtgacgtggaaggtgaccgatggagtt
catcagcatatcgacgtgcgtgaagagggcaaagaaaatgcattttccctgggtcatcga
ttgtggattggcggtgaggaatttgaggatcttgatgaaatcctcgctcgacatataaat
ccaatggctgcttatgcttccgaactacttgaattcaaatactataaagcaagtgtcaat
ggaattaaggacaaagccgaggaattgctcaagacccagaagaaggagaatcctggcggc
attccttacattatttcagcagctaaaaatattccgggaaaatttctcctttcctacttg
ccacgagttcaatgtcgtcatgaatatgtgacagtttcgccagagggttttcgatttcgt
ggacaaatgttcagcaaagtggctgatttattgaaatggttcaaggaacatttccgagat
ccgctaccagggcaagcgactccgagcactccgagaggaatgatgtcgactagaactccg
taccatacaccaggaggtgttaatcaagaggcgattcagagagtggctcaaaatatgccg
caacatattttaagttcgttgtcgcaggttgcgaatcagaagatgtaccagccacacact
cctggtgctgcgggctacagtggcattcacacttatccaaatacgccttacactccatcg
ggtcaaacccccttccaagcaatgacgccttatcgaacgccacaaactccatttttgcaa
ccagcaccggtttcgatccaaccaatccaccacagtagccccagtctctcgagaccaacg
ccgcctccttctaatgctccttccggaaataatatggattggaaaaaagctgccatggcc
tgggctcgtcaggccggttccaataaatcttctggcaatactccaagattcgatgaagat
cgtcgaactccacgtcgctatgaaaatgaagacaatcgtcacttcgacatgggcgacaat
acattcacaaaaggattgtcacgtgacaatacaccgaaacaatcgtttgatgataataat
tcattttcttctagggacaagactccaacgtactcatcatcgggctcattccgaggaaaa
tcaccgtcgtattcaatgaatcaacggggaaaatcaccatcactgtcaagtacatcaaga
ggtaaatcgccatcatactcgcgtaataaatcgccaaaatataagcaaagtccgcgaagt
cgtggtggtggtggcggcggtggtgggaaatttaatgcaaatacatcgcgtgacaaaagt
ccatcttatgatgataatccatttacaattggctcgtcgagagatcgacagagagatgat
gatcaagagaaggacgataatccatttacaattggctcgactcgtgagaaaatgagaact
ccgtcgtataaatcgccacgaaacagtactccgttcacgaattctagtccgaggagtatg
tcattgagtggcgatggaacgccactttacgacgaaagctaa
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integrated database retrieval system
