Leptopilina heterotoma: 122510425
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Entry
122510425 CDS
T08438
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03022
Basal transcription factors
lht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122510425
09124 Replication and repair
03420 Nucleotide excision repair
122510425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lht03021
]
122510425
03400 DNA repair and recombination proteins [BR:
lht03400
]
122510425
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122510425
Transcription machinery [BR:
lht03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122510425
DNA repair and recombination proteins [BR:
lht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122510425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
122510425
NCBI-ProteinID:
XP_043480995
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MGPPKRFKKDTSDKRFVKKTKDDYEDYIEEETADGEPEGIPTAASVDIEKSGTITEDEFG
AKDYRALMSLKTDHESRALWVAPNGHIFLESFSPVYKQAQDFLVAIAEPVSRPKYIHEYK
LTAYSLYAAVSVGLQTHDIIEYLDKLSKTSIPNGIVEFIKMCTLSYGKVKLVLKHNKYFI
ESAFPEVLQTLLKDRTIQDCRITRSVDEVDKDGLITCIQEKSEALQFGSKPTTAAATAAT
ATTTTTTETSSSSKTIPDEIATVYEKIDKEDEDEEEEQQLKTISFEVNQEKIEVIQKRCI
ELDHPLLAEYDFRNDTVNPNINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAG
KSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCGI
LITTYSMITHTQKRSWEAEQTMKWLQDQEWGIMVLDEVHSIPAKMFRRVLTIVQSHCKLG
LTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTAEFYREYLNC
KMSRKLLLYVMNPNKFRYCQYLIRYHERRGDKTIVFSDNVFALKHYAKEMQRPFIYGPTS
QSERIQILQNFKYNIKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILR
AKKGAIAEDYNAFFYTLVSQDTFEMDYSRRRQQFLVNQGYAYKVITKLAGMDEESDLFYK
TREEQIQLLQKVLSASDMDADEERIPGEGGRSIVRKAGNMASTSGADDAVYYEYKKLNAN
AQSKHPLFKKYRN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaccgaaaagattcaagaaagacacatcagataaacgttttgttaaaaaaact
aaggatgattatgaggattatatcgaagaggaaaccgctgatggggaaccagagggaatt
cccacagcagcctctgttgatattgaaaaaagtggaacaattacagaagatgaatttgga
gcaaaagattatcgtgcactaatgagtttaaaaacagatcatgaatccagagctctatgg
gtcgcaccaaatggacatatctttttagaatcattttcaccagtttataaacaagctcaa
gattttttagtcgcaatcgccgaacccgtatcacgtcctaaatacattcacgagtacaaa
ttgacagcttactctctatatgcagctgttagtgttggtcttcaaacacacgatataatt
gaatatcttgataaactgagcaaaacaagtattcccaatggaattgttgaatttatcaaa
atgtgtactttgtcttacggaaaggtcaaactggttttgaagcataacaaatattttata
gaatccgcatttccagaagttttacaaacgttactaaaagatcgaactattcaagactgc
agaatcacgcgtagtgttgatgaagttgataaagatggattaattacttgtattcaagag
aaatccgaagccctacagtttggatcgaagccaactacagcagcagcaacggcagcaaca
gcaacaacgacaacaacaactgagacttccagttctagtaaaacaattccggatgaaata
gcaactgtttatgagaaaattgataaggaagatgaggacgaggaggaagagcagcaattg
aaaactataagttttgaagttaaccaagaaaaaattgaagtgatacagaaaagatgtata
gaattagatcatccattattagccgaatacgattttagaaatgatacagttaatccaaac
ataaacatcgatctgaaaccttcagcagttttgaggccatatcaagagaagagtttgcgg
aaaatgtttggaaatggtcgagcaagatccggagtaattgtcctgccttgcggtgcgggt
aaaagtttagttggagtcaccgcttgttgtacagtcagaaagcgagccttggtcctttgt
aattctggtgtttccgtcgaacaatggaagcaacagtttaaaatgtggtccactgctgac
gattcaatgatatgtcgattcacaagcgaagcaaaagataaaccaatgggttgtggaatt
ttaatcaccacatattctatgattacgcatactcaaaagcgttcatgggaagctgaacaa
acgatgaagtggcttcaagatcaagaatggggaataatggttttagatgaggtacactcg
atacctgcgaaaatgttcagaagagtattaacgatagttcaatcgcattgcaaattggga
ttgactgccacattgttgcgtgaggatgataaaattgcagaccttaattttttaattggc
cctaaactgtacgaggctaattggttggaattgcaaaagcgaggatttatagcaagagtt
caatgcgccgaggtttggtgtccaatgactgcggaattttatagagaatacctcaattgt
aaaatgagtagaaaattgttattgtacgtaatgaatccgaataaatttcgatactgtcaa
tatctcattcgatatcacgagaggcgtggagataagacaattgtcttctcggacaatgtt
tttgctttgaagcattacgctaaggaaatgcagagaccttttatttacggtccaacgagt
cagagtgaaagaatacaaattcttcagaacttcaagtataatataaaagtgaacacaata
tttgtgagtaaagtcgctgacacgtcttttgatttaccagaagctaatgttttgattcaa
atatcgtcacacggtggatcgagacgtcaggaagctcaacgattgggaagaattttacgt
gccaaaaaaggagcaattgctgaagactataatgccttcttttacactttggtttctcaa
gatacattcgaaatggattattccagaagacgacaacaatttttagtaaatcagggttac
gcttataaagtcatcaccaaattagctggaatggatgaggaatcggatttattttacaaa
acacgagaggaacaaatacaattgctgcaaaaagttttatcagccagtgatatggatgct
gatgaagaaagaattccaggagagggtggacgttccattgttcgcaaagctggaaatatg
gcgtcaacttctggagcggacgatgctgtttattacgaatacaaaaaattgaatgctaac
gcacaaagcaaacatcctctatttaaaaaatacaggaactaa
DBGET
integrated database retrieval system
