Leptopilina heterotoma: 122510728
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Entry
122510728 CDS
T08438
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
lht
Leptopilina heterotoma
Pathway
lht03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122510728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122510728
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122510728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
VPS28
Motif
Other DBs
NCBI-GeneID:
122510728
NCBI-ProteinID:
XP_043481513
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MEKVNEINKTGCKELLVWRMFLAIVLSIIFQFFLMSIIILVTNLNPINPFAWMLNTWNVI
FSFRMWWYFLLLATVTFLQGFMCSKDYLNPPKYMSNRFFIFCSMLGPRNVLLCTLYIIVG
GILTWLHLSLKGGPYSSLTKNCNTTDGLCLVEEYFFLLLGGFWSGLYFFTKYNIYAVQFL
QFSIIPQTKFSQIKRAIHELLPGAMSSAVWPALYFTGFYCLFGAYSRSFLMYLIPFSLED
EPLDKISRLLNLSLIFYLWLYGSLFVIMANTMHLMFQASLTEWIPFDIERHSVFNNEKLS
ITLAEVLAMEDIPIIRQLGYLDLVTLAQKDKSRRGLLFTLSKPGGHPYNWNQIIENCLST
IAEYTVELNSIFSVKEEKQLESELNPSGVYQKPYQYHMRSLAASTTKSMETPPEATSDQF
FIRLYKNYKQNVIDYLFSKPLICFIFGEQLDSKARHVLSKSQPIVWAEDAISSLAAVSLT
EDPYGIVLKDLPKIIETLLSIKQALDKLQKASVLMRKPVSSDKVLRQCLTSLRSATRRSI
YRIVTTFKDFIDDLKLAPEIVDQLHPFFTYRE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtgaatgaaataaacaaaacaggatgcaaagaacttttggtatggcgtatg
tttcttgcaattgtattaagtattatctttcaattcttcctgatgagcatcattattctc
gtgacaaatttaaatcccattaatccatttgcatggatgctaaacacgtggaacgtgata
ttcagttttcgaatgtggtggtactttttacttttggcaacggttacattcctccaggga
tttatgtgcagtaaagactatttaaatccaccgaaatatatgtcgaatcgattttttata
ttctgcagtatgctggggccgaggaatgttttattgtgtacattgtatattattgttgga
gggattttgacatggttgcatttatcgcttaagggtggaccttacagttctcttacgaaa
aattgcaacaccactgatggcttatgtcttgtggaggaatatttctttttacttcttggt
ggtttttggagcggattgtatttcttcacaaaatataatatttacgccgtacaatttctc
cagttctcgataattccacagacgaaattttcgcagatcaagagagcgatacatgaatta
ttgccgggtgcgatgtcgagtgctgtttggccagctctctatttcacgggtttttactgt
ctattcggagcgtacagtcgatcgtttctcatgtacctgattccattttccctcgaggac
gaaccactggacaaaatatcgagacttctgaatttatcgttaattttctacttgtggttg
tatggctctttgtttgtcataatggcaaatacaatgcatttgatgtttcaagcctcgctc
accgaatggattcccttcgacattgagcgtcacagtgtctttaataatgaaaaactcagc
atcacacttgccgaagttttggccatggaggacataccgattattcgacaattgggatat
ttggaccttgtgaccctggcgcagaaggataaatcaagaaggggattgctcttcactctc
agcaaacccggcggtcatccttataattggaatcaaattattgaaaattgcctctcgact
atcgccgaatatacagtggaattgaattctattttttcggtgaaggaagaaaaacaattg
gaaagtgaattgaatcctagtggtgtttatcaaaaaccttatcaatatcatatgagaagt
ttggcagcgtcgacaacgaaatcaatggaaactccacccgaagctactagtgatcaattc
ttcattcgactgtacaagaattacaaacaaaatgtaatcgactatcttttctcgaagcca
ttaatttgttttatattcggcgagcaattggatagtaaagcacgtcatgttttgtcgaaa
agtcaaccgattgtttgggctgaggacgcaatttcatcgctagccgctgtttccttgacc
gaagatccctatgggattgttcttaaagatttgccgaaaattatcgaaactctcttgagt
ataaagcaggctcttgataaattgcaaaaggcgagtgttcttatgagaaaacccgtgagt
agtgacaaagtattgagacaatgtttaacatctttacgtagtgctacgcgccgaagtatt
tatcgaattgtcaccacttttaaagattttatcgatgatttgaaactcgctcctgaaatt
gtcgatcaattgcatccgttttttacatatcgggaataa
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