Leptopilina heterotoma: 122511353
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Entry
122511353 CDS
T08438
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lht
Leptopilina heterotoma
Pathway
lht03022
Basal transcription factors
lht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122511353
09124 Replication and repair
03420 Nucleotide excision repair
122511353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lht03021
]
122511353
03400 DNA repair and recombination proteins [BR:
lht03400
]
122511353
Transcription machinery [BR:
lht03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122511353
DNA repair and recombination proteins [BR:
lht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122511353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
PH_SLA1
Motif
Other DBs
NCBI-GeneID:
122511353
NCBI-ProteinID:
XP_043482462
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAFMLEKSNKVSVSHKYGDIKLQKISPEGK
SKIQLQVVLHDGQSSTFHFVNKNGQEAQIKDRDDVKELLQQLLPKFKKKVNKELEEKNRL
LQENPSLLQLYRDLVITQVVSSEEFWAQHAVEYMQAKKVQQQEIGVNGAFLADIKPQADG
CNGFKYNLTTDIIECIFKTYPAVKRKHQENVPNKMKESEFWMKFFQSHYFHRDRINAGTK
DLFTECAKIDDQEMKKDIQTGINDPLLDITSFEDKNLDENYGSEVGKADKPSGNIVHQNM
IKRFNQHSIMVMKASTAKSSTNSNEPQLNGSASSASKHPTTNDNLDEPKTKKLRIQEKLL
YDDLDTSCDVQTNNVMPLKLTQIDRYLHGPVPGSEKFGVHQKEIPIILNQMRIETTKWGN
NTNLPRQDSKTLVSPGAAVLALGELTPGGALMKGFREESLGQLIPKDLEKELRNVYVCLC
ELLKHFWRSFPPTTPQLEDKAVRMHEALQRFHSAKLKPFEDRMQREFSAVSQHLTSHLNQ
LLNAAYKKFAVWQQRKMHMR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcatcggaagatgttcttatgcaagtaggacaggtccgttataaaaaagga
gatggcactttatatgtgatgaacgaaagaatagcttttatgctagaaaaaagcaacaaa
gtatctgtcagtcataaatatggtgacattaaactgcaaaaaatctctcccgaggggaaa
tcgaaaattcaactgcaagtagttttacatgacggacaatcatcgacttttcattttgta
aataaaaatggccaagaagcacaaatcaaagatcgtgacgatgtgaaggaattgctgcaa
caattactaccgaaattcaaaaagaaagtcaataaagaactagaagaaaagaataggtta
cttcaagaaaatccatctttattacaattatatcgcgatttagtaatcactcaagtagtt
tcgtctgaagaattttgggcacagcatgccgtcgaatacatgcaggcaaaaaaggtccaa
caacaagaaattggtgtaaatggcgcctttcttgccgatatcaaaccacaagctgacgga
tgcaatggattcaaatataatttaaccaccgatataatagagtgtatatttaaaacctat
ccagctgttaaaagaaagcaccaggaaaatgtgcctaataaaatgaaggaatcagaattt
tggatgaaattttttcaatcgcattattttcatcgagatcgtatcaatgcagggaccaag
gatctattcaccgagtgtgccaaaatagatgatcaagaaatgaagaaagacattcaaacg
ggaatcaatgatcccttgctggatatcacctcttttgaggataaaaatttagatgaaaat
tacggtagtgaagtgggaaaggcagacaagccttctggtaatattgtacatcaaaatatg
atcaaaagatttaatcaacacagcattatggtcatgaaagctagcactgccaaatcttca
acaaattcaaacgaaccacaattaaatggatccgcttcttcggcgagtaaacatcccact
acaaatgataatctagacgaaccaaagactaaaaagctcaggatacaggagaaattatta
tacgatgatttggatacgagctgtgacgtacagacaaacaatgtaatgcctcttaaatta
acgcaaatcgatagatatttgcatggaccagtgccgggaagtgaaaaatttggagttcat
caaaaagaaataccaataatattaaatcaaatgaggatagaaacaacaaaatggggaaat
aataccaatttaccgcgacaagactcgaaaactttagttagtccaggagcagcagtgttg
gctcttggagaactgactcccggaggagctttaatgaaaggttttagagaagaaagtctc
ggacaactaataccaaaagacttagaaaaagaattgcgcaacgtctacgtttgcctttgc
gaacttcttaagcatttttggagaagtttcccaccaacaacacctcaattggaagataaa
gccgttcgtatgcacgaggcacttcaaaggtttcattctgcaaaactcaaaccatttgag
gatcgtatgcagagagaattctcagcagttagtcaacatttaacgagtcatttaaatcaa
cttttgaatgcagcctacaagaaatttgctgtttggcaacaacgaaaaatgcatatgagg
tag
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