Leptopilina heterotoma: 122511766
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Entry
122511766 CDS
T08438
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03020
RNA polymerase
lht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122511766
09124 Replication and repair
03420 Nucleotide excision repair
122511766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lht03021
]
122511766
03400 DNA repair and recombination proteins [BR:
lht03400
]
122511766
Enzymes [BR:
lht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122511766
Transcription machinery [BR:
lht03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122511766
DNA repair and recombination proteins [BR:
lht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122511766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
122511766
NCBI-ProteinID:
XP_043483173
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MSTFESKMPVRQVKRVQFGILSPDEIRRMSVTDGGIRFSETMEGGRPKQGGLMDPRQGVI
DRNSRCQTCAGNLTECPGHFGHINLAKPVFHIGFITKSMKILRCVCFFCSKLLVSPNNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNICEGGDEMDINKDGTEIPLADRKPGHGGCGRYQ
PSLKRSGLDISAEWKHVNEDSQEKKMPLTAERAHEILKQITDEESFILGMDPSFARPDWM
IVTVLPVPPLSVRPAVIMYGSARNQDDLTHKLADIIKTNNELMRSEEKGAATHIVSEIIK
MLQFHVATLVDNDLPGLPRAMQKSGKPLKAVKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDSGERID
LRFHPKASDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLMAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGSSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQNLPT
IKLSNKAFEKRFKFDPTNERYLRRIFSEEIVREMMGSGEVISELEKEWEQLSRDRSVLRE
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLEKCVIVAGEDR
LSKQANENATLLFQCLVRSTLCTKCVSEDFRLSSEAFEWLIGEIEARFHQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLSMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDNK
FQDAEKESIDKMEDDTFLRCIESNMLSEMTLQGVEAIGKVYMHLPQTDAKKRIIVTDTGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICETFEVLGIEAVRKSIEKEMNTVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
TDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKSGMEIPMATGANLMGGTGMFYGTAAT
SSMSPRMTPWNQIGATPAYGASSMSPALESGMTPGAGCFSPSGASDASGMSPAYSAYSPQ
PGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPSYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPRYTPAS
PNYSPTSPSYSPTSPSYSPSSPQHTPGGSTRYSPSSPNYSPTSPTYSPSSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDDS
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtctactttcgaatcaaaaatgcctgttcgccaggtgaagcgagtgcaatttggcata
ctttcgcccgatgaaattcggcgtatgtccgtcactgatggcggaattcgtttttccgaa
actatggaaggaggccggccaaaacaaggcggactcatggatccaagacaaggtgtaatt
gacagaaattcacgatgtcaaacgtgcgctggaaatcttacagaatgccctggacatttt
ggtcatataaatttagcaaaaccagtatttcacattggtttcatcacaaaaagcatgaaa
attctcagatgcgtttgctttttctgctccaaactcctagttagtccaaataatccaaaa
atcaaagaaatcgtcatgaagacaaaaggacagccccgcaagcgtctcacatttgtctac
gatttatgtaaaagtaaaaacatctgcgagggtggcgacgaaatggacataaacaaggac
ggtacagaaattccgcttgccgacagaaagcccggtcacggtggttgcggtcgctatcaa
ccgagtctgaagagatccggtctcgacatatccgccgaatggaagcacgtcaacgaagat
tcacaggagaaaaaaatgcccctaaccgccgaaagagcgcacgaaattctcaagcaaata
acagacgaggagtcttttattctaggcatggatccaagtttcgctcgtcccgattggatg
atcgtcactgttctacccgtgccaccgctgtcggtgcgtccagccgtcataatgtacggc
tcggccagaaatcaagacgatttgacacacaaactggccgatattatcaagacgaataac
gaactcatgaggagtgaggagaagggcgccgccacgcatatcgtgtcggaaataataaaa
atgctccagtttcacgtggccactttggtggacaacgatctgccgggtttgccgcgagca
atgcaaaagtcgggcaaaccgctcaaagccgtgaaggcgcgactcaagggcaaggaggga
agaattcgtggtaatctcatgggtaagcgtgttgacttctcagcgcgtacggtcatcaca
ccggatccaaatctccgaatcgatcaagtcggcgtgcccaggagtatcgctcagaatctc
acattcccggagatcgtcactccgttcaatatcgataaaatgcaggaactagtgcgaagg
gggaattcgcaatacccgggagcgaagtatatcgtcagggacagtggcgaacggatagat
cttcgatttcatccgaaggcttctgatctgcatctccagtgtggttataaggtggagaga
catatccgcgacggggatctggtgattttcaatcgtcagccaactttgcacaagatgagt
atgatgggtcacagagtgaaggtcctgccatggagtacgtttaggatgaatctcagttgc
acgtcgccgtacaatgccgatttcgacggcgacgaaatgaatctgcacgttccgcagtcg
atggagacgagggccgaggtggagaatattcacgtgacgcccaggcagattatcacaccg
caggcgaataaaccagtcatgggtatcgtgcaggacacactcatggctgtgaggaagatg
acaaagagggatgtgtttatcgagaaggagcaaatgatgaatatcttgatgttcctgccg
agttgggatggaaaaatgccgcaaccctgtattttgaaaccaaagcccctttggactggg
aagcagatattctcgttgattatcccggggaatgtgaatatgatcaggacgcacagtaca
catccagatgaggaggacgatggtccttacaaatggatttcgccaggagacacgaaagta
atggtggaacatggagaacttgtgatggggattttgtgtaagaagacgctgggttcatcg
gcgggatcattgctgcatatttgtatgttggagttgggacacgaggtttgtgggagattt
tacggaaatattcagacggtgattaataattggttgttgctcgaggggcattcgattgga
attggcgatactattgcggatccgcagacctatttggaaattcagaaggcgattaaaaag
gcgaaggaggatgtcatagaggtgattcagaaggcgcataacatggagctggagcctacg
cctggtaatacgctgaggcagactttcgagaatcaggtgaacaggattttgaacgacgct
cgtgataagacgggcgggtcggctaagaagtcgctcactgagtataataatctgaaggct
atggtcgtgtcgggttcgaagggatcgaatattaatatttcgcaagttatcgcctgtgtg
ggacagcagaacgtagagggaaagcggataccgtttgggttcaggaagaggacattgcct
cacttcatcaaggacgattacggtcctgagtcgaggggcttcgtagagaactcctacctg
gccgggttgacgccctcggagttctatttccacgccatgggaggaagagagggtcttatt
gataccgccgtaaagacggccgagaccgggtacattcagcgacgtctgatcaaggctatg
gagtctgttatggtgcactacgacggaacggtgaggaattcagtgggacaactcatccag
ttgagatacggcgaggacggtctctgtggtgaggcggtcgagttccagaatctcccgact
atcaaactcagcaacaaggcttttgaaaagagattcaagttcgatccgacgaacgagcgt
tacttgcgcaggattttcagcgaggaaatcgtgcgggaaatgatgggctcaggggaagtg
atttccgaattggagaaggaatgggagcagctgagtcgggatcgatcggtgttgagggag
attttcccaagtggagaatcaaaggtcgtattgccctgcaatctgcagagaatgatttgg
aacgtgcagaagatctttcatattaacaaacgagcgccgactgatctgagtccgatgaga
gtgatccagggtgtgaaggacctgctggagaagtgtgtgattgtggccggtgaggacaga
ctcagcaagcaggcgaacgagaatgcgaccctcctcttccagtgtctggtgagatcgacc
ctgtgcaccaagtgcgtgtcggaggacttccgactgtcgagcgaggccttcgagtggttg
atcggagaaatcgaggctcgtttccatcaggcgcaagtctcacctggtgaaatggtggga
gcgctcgctgcccagtctctaggagagcccgccactcagatgacactcaacactttccat
ttcgccggtgtgtcctcgaagaacgtaactctcggtgtgccgagactcaaggaaatcatc
aacatcagtaagaaaccgaaagctccctcgctaaccgtttttctcaccggagctgcggcc
cgcgacgccgaaaaagctaaaaacgtcctctgccgcctggagcacacaaccttgaaaaaa
gtcacagccaacacggcgatttactacgatcccgatccacaaaatacagtcatcgccgag
gatcaagaattcgtgaatgtctactacgagatgcccgatttcgatccaacgagaatttcg
ccctggctgcttcgtatcgaactcgaccgaaagagaatgacggacaagaaactcagtatg
gagcagattgccgagaagatcaacgccggctttggcgacgatctgaattgtatattcaat
gacgacaatgctgagaaattggttctgcgaataagaattatgaacagtgatgacaataaa
ttccaggatgcggagaaggagtcgattgacaagatggaggacgatacgttcctgaggtgt
attgaatcgaacatgctgagtgaaatgacactgcagggggttgaggcaattggtaaggtg
tacatgcacttgccgcaaactgacgcgaagaagagaatcattgtcactgatacgggagaa
ttcaaggcaatcgctgaatggttgctggaaactgatggtacgagtttgatgaaggtactg
agtgagagggacgtcgatccagtgaggacattcagtaacgatatttgtgagacttttgaa
gttctgggtattgaagctgtgagaaaatcaattgagaaggaaatgaatactgtattgcag
ttttatggactttacgtcaactatcggcatcttgcgttactttgtgacgtcatgacggct
aagggtcatcttatggccatcactcgtcacggtattaacagacaagacactggagcactt
atgagatgttctttcgaagaaacagtagacgttttgttggacgctgcttctcatgcagag
accgatcctatgagaggtgtttctgaaaacattattatgggacaattacctcgaattggc
acaggttgctttgatttattactcgacgccgagaagtgtaaatctggaatggagattcca
atggctaccggagcaaatttaatgggtggaactggaatgttctacggaactgcagccaca
tcgagcatgagtcctcgcatgactccttggaaccagattggagcgactcctgcttacggt
gcttccagtatgtcaccagcactggaaagtggaatgacaccaggagctggatgcttctca
ccttcgggtgcatcggacgcatcaggaatgtcgccagcatattcggcttactctccacaa
cctggcagtcccggcagtccaggaccaagtatgagtccttatccaatgtcaccagcgggc
ggtgcgtctccaagttattcgccaacatcgccagcttatttgccgacttcgccaagtatg
acaccgtcaagtccaaattactccccaacgagtccaagttattcgccgacaagtccaaac
tattcgccaactagtccaagttactcgcccacgagtcctagttattcgccaacgagtcct
agttattcaccgacgagtccaagttactcaccgacgagtcccagttattctccgacaagt
ccgagttattcgccaacaagtccgagttactcgccaacgagtccgagttattctccgaca
agtccgagttattcgcccacgagtccgagttattcaccaacaagtccgagttactcgcca
acgagtccgagttactcaccgacaagtccgagttattctccgacaagtccgagttactcg
ccaacgagtccgagttactcaccaacgagtccgagttactcgccgagttctccaaactac
acacccgcttctccatcttactcgccgacgagtccaagttactccccgagttcccctcaa
tactcgccggcgagtccaagctactcgccgagttctccaaagtactcgccgacaagtccc
agttattcgccaacatctccatcgttcgctggaacttcaccacgctacacgccggccagt
cccaattactcgccgacgagtccgagttactcgccaacgagtccttcctactcgccgagc
tctccccaacacactcctggcggcagcacaagatactcgccgagtagtcccaattattcg
ccaaccagtcccacgtattcaccctcgagtccacagtactcgccctcaagcaccaaatat
tctcccacaagtcccacttacactcccacaagtcccagttattcaccgacgagtcccact
tactcccctccagttccagggtactcgcccacaagtcccacctattcgccagcatcgcca
gcctacgaaaccgacgactcttaa
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integrated database retrieval system
