Leptopilina heterotoma: 122511968
Help
Entry
122511968 CDS
T08438
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122511968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lht03041
]
122511968
Enzymes [BR:
lht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122511968
Spliceosome [BR:
lht03041
]
Complex A
U2 snRNP components
U2 related factors
122511968
Complex B
122511968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
122511968
NCBI-ProteinID:
XP_043483492
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSKSRSNTPEKRRRRSRSRDREKGRHRDRKSRSKERDRDRNER
RERHDRDKKSYSGDNKEKRVSSSKSSRLGKERTNRSRSRERKDKEKWDNEELPFDPLNLD
KEEEQKRLELEMQKRRERIERWRADRKKKEQEATRKDGKSSILANIQIPSKKWSLEDDSD
EDTPVTQANNNKESKEDEDEPKEDSAVPAEESKAEEVDPLDAFMAEVQEEVRKVNKLDNK
NPKTSNNGPNTGVTQTTGVLIVTGVAKRKVQKHKGELIEQNQDGLEYSSEEEGENLHETA
AGIANKQKRELAKVDHATTEYLAFRKSFYVEVPEIAKMTSEEVDAYKEELEGIRVKGKGC
PKPIKSWAQCGVTKKEIEVLKKLGYEKPTPIQCQAIPAIMFGRDLIGIAKTGSGKTLAFL
LPMFRHILDQPALSEGDGPIALIMTPTRELCMQIGKDSKKFSKSLGLSHVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIM
ENVRPDRQTVLFSATFPRQMEALARKILTRPVEVQVGGRSVVCKDVEQHVIVLEEDQKFY
KLLEILGHYQQKGSIIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKA
GRTKLLVATSVAARGLDVKCLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQ
ERYAGDILRAHELAMVPVPEALRKLWEDYKARQVADGKKVHTGGGFSGKGFKFDESEAAL
ANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREISRPSVPNISVPGQPVPS
ATDKLELAKKLASKINIAKNLGAEAKGVSQQAAEAILKGAGPTNLITAKTVAEQLAAKLN
TKLNYQPREEDLVEGECEGGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAG
LTVRGTYIVPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELMKLQTSGAHNVS
RGRYKVL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtacgaagcagtgataaggataggcaccataggaggcggtctagatccagatcgaaa
tctcgttctaatactccagaaaaaagacgaaggcgatcaaggagtagagatcgagaaaaa
ggaagacatagggacagaaaaagtcgttctaaagaacgtgatagggataggaatgaaaga
cgagaacgacatgacagagacaaaaaaagttatagtggagataacaaagaaaaacgtgtt
agcagttcaaaatcttctcgtttagggaaagaacgaaccaatagatctcgttcccgtgag
cggaaggataaagaaaaatgggataatgaggagttaccatttgatccattaaatcttgac
aaggaagaggaacaaaagagattggaactggaaatgcaaaaaagacgagaacgaatagaa
agatggagagcagatagaaaaaagaaagaacaagaggcaactagaaaagatggaaaatct
tctattctagctaatatacaaataccttcaaagaaatggtctttagaagacgacagcgat
gaggataccccagttacacaagcgaataataataaagaaagcaaagaagatgaagacgaa
ccgaaagaagattcagcagtacctgctgaagaaagtaaagcagaggaagttgatccacta
gatgcttttatggctgaggtacaagaagaagtgagaaaagttaataaattggataataaa
aaccccaagaccagcaacaatggtccaaatactggagttactcaaacaactggtgtactc
attgttactggagtagctaaaagaaaagttcaaaagcataaaggtgaattaatagagcaa
aatcaagatggattggaatattccagtgaagaagaaggagaaaatctacatgagacagct
gctggtattgcaaataagcagaaaagagaactggctaaagttgatcacgcaacaacagaa
tatttagccttcagaaaatcattttacgttgaagtacctgaaattgcaaaaatgacatcg
gaagaagttgacgcttataaagaagaattggagggaattcgtgtgaaaggaaaaggttgt
ccaaaaccaattaagtcttgggctcaatgtggtgtaaccaaaaaggaaatagaagtattg
aagaaactgggatatgaaaaaccaactccaattcagtgtcaagctattcctgccattatg
tttggacgtgatttaattggaatcgcaaaaactggaagcggcaaaactctagcttttctc
ttgccaatgtttagacacattcttgatcaaccggcattaagtgagggagatggaccaatt
gctctaatcatgacacctaccagagaactttgtatgcaaataggaaaagattcgaagaaa
ttttcaaaatcactgggtctctctcatgtttgcgtgtacggtggcactggtatttcggag
caaattgctgaactgaaaagaggtgctgaaataattgtctgcactcctggaagaatgatc
gatatgttggcggcaaacaacggaagagtcactaatttacgaagagttacttacgttgtc
ttagatgaagctgaccgaatgtttgacatgggttttgaaccacaggtaatgcggataatg
gaaaatgtgcggccagatcgacaaactgttttgttcagtgcaactttccccagacaaatg
gaagctttggctagaaaaatacttactcggccagttgaggtgcaagttggaggacgatct
gttgtttgtaaagatgttgaacaacacgtcatagttcttgaagaagatcagaagttttac
aaacttcttgaaatacttggacattatcaacaaaaaggctctataatagtcttcgtcgat
aaacaagaaaacgctgatacattgctaaaagatttgatgaaagcatcttactcctgcatg
tctttgcatggaggaatagatcagtgtgatagagattcaacaatattggatttcaaggct
ggacgaacgaaattattggtggccacgtctgtcgcagccagaggattggatgtgaaatgt
cttgttcttgttgttaattatgattgtccgaatcattatgaagactatgttcatcgatgt
ggaagaactggcagagctggaaataaaggatatgcttacacgtttattacttcagagcaa
gagaggtatgctggagatatcttacgagctcatgagttagccatggttcctgtacctgaa
gcattaagaaagctttgggaagattacaaagctcgtcaagtagcagacggtaaaaaagtt
cacactggtggcggttttagcggaaaaggttttaagtttgatgaatctgaagctgctttg
gctaatgagaagaagaagtttcaaaaagccgctctcggtttgcaagactcagacgatgaa
gacattgaaaatgatattgatcaacaaattgaaagtatgttggcacctaaacgaactgtg
cgagaaatatcaagaccttcagttcccaatatttctgtacccggtcaacctgtaccaagt
gcaacggacaaattggagttagccaagaagcttgcatcgaaaataaatattgccaaaaat
ttgggcgccgaagcaaagggggtttcgcagcaggcggcagaagcaattctcaaaggagcc
ggacctactaatctcattacggcgaaaactgttgcggaacaattggctgcaaaattgaac
acaaaactgaattatcaaccaagagaggaagatttagttgaaggagagtgtgaagggggt
gaacaaaccttccgaaaatatgaggaagaacttgaaatcaatgatttcccacagcaagcc
agatggcgggtaactagtaaagaagctttagcgcaaatttcagaatattcagaagctgga
cttaccgtcaggggtacttacattgtacctggaaaagcaccacctgaaggagaaagaaag
ttgtaccttgcaattgaatcgacgagtgagttagctgtaagcaaagcaaaagctgaagta
tcgcggttaattaaagaagaattaatgaaattacagacgtctggagcgcataatgtctcg
cgtggccgttataaagttttgtaa
DBGET
integrated database retrieval system
