Linepithema humile (Argentine ant): 105667465
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Entry
105667465 CDS
T04898
Symbol
Ssrp
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105667465 (Ssrp)
03036 Chromosome and associated proteins [BR:
lhu03036
]
105667465 (Ssrp)
Transcription factors [BR:
lhu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105667465 (Ssrp)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105667465 (Ssrp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
GRAM
Motif
Other DBs
NCBI-GeneID:
105667465
NCBI-ProteinID:
XP_012214695
LinkDB
All DBs
Position
6:complement(260243..263936)
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AA seq
746 aa
AA seq
DB search
MDFLEYPDIFAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWG
LRIFLKNGTLHRFKGFKEADQEKIAKFFTVNYKKDMLEKELSLKGWNWGTAKFTGSVLSF
DVSHHTAFEIPLYDVSQCTTGKNEVTLEFHQNDDAPVSLLEMRFHIPGGDSADSDPVDAF
HQQVMEKASVISVSGDAIAIFREIYCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLR
LFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFTEKELKEKYEDK
LTKELTGPTYEVLGKVMKVIINRKLTGPGHFTGHTGAPAINCSFKAAAGFLYPLERGFIY
VHKPPIHIRFEEIASVNFARGGGSTRSFDFEIELLSGVVHTFSSIEKEEYGKLFDFITAK
KLRVKNRGKSDKLTYDEDFGDSDQEDEPDAYLARVKAEAEERDGVENQDSEEDSTDEDFN
PNQDESDVAEEYDSNPNSSESEEDSDASEASNKKKKKEKKEKKPKSAKTVSEKPRKRRKP
KKEKDANKPKRPPTAFMLWLNNARESIKAENPGIAVTEIAKKGGEMWRELKDKSEWEAKA
VKAKKEYAASMKEYEASGGGKSKEKEKTEKKKEVKKETKKEVKKETKKESPGKLMSGTSF
KSKEYISDDDSSSDESKKSEKKSPDENEEKEEKEKKKKNEKRAAKDTGKKVVKKRKQDQS
DDGESDTEEPTESTPPSSDADSKDSD
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttggagtatccagacattttcgctgaggttaagggtgctatgacaccaggc
agattaaagttgaccgatcagcatttaatcttcaagaatcagaagactggaaaagtggag
caaatttctgcctctgatatggaaatggtaaactaccaaaagtttattggcacttggggt
ttgcgtatctttttaaagaatggcactctgcatcgcttcaagggctttaaagaagccgat
caagaaaagattgctaaattcttcactgtcaattataaaaaggatatgttggaaaaagaa
ctgagtttaaaaggttggaattggggtactgcaaagtttacaggatctgtcttaagcttt
gatgtaagtcatcacactgcttttgagatacctttatatgacgtgtcgcagtgtactaca
ggaaaaaacgaagttaccttggaatttcatcagaatgatgatgcaccagtcagtttattg
gagatgaggtttcatattcctggtggcgacagtgcagattcggatcctgttgatgcattt
catcagcaggtgatggagaaggcatctgtaatcagtgtgagcggtgatgcaattgccata
ttcagggagatttattgtctaacaccgcgcggtcgctatgacataaaaatttttcagtcc
ttttttcaattacacggcaaaaccttcgattacaaaattcccatgtcaaccgtcctgaga
ctctttctactgccgcacaaagataatcggcaaatgtactttgttgtgagcctggatcct
cccataaaacaaggtcaaacacgatatcattatctagtactcctatttaatcaagaggaa
gaaacttccatagagctacctttcacagaaaaagagctaaaggaaaagtatgaagacaaa
ttgactaaagaattaacaggaccaacatacgaagtgctcggcaaggtgatgaaagtaatt
attaatcgaaaattgaccggacccggacatttcaccggtcataccggggcacccgcgatt
aactgctccttcaaagctgcagcgggattcctgtatccgctcgaacgaggtttcatttat
gtacacaaacctccgatacatattcgcttcgaggaaatagcctcggtgaactttgcgcgc
ggcggcggatctacaagatccttcgatttcgagatcgaacttctgagcggcgtggtgcat
acattcagcagcattgagaaggaggagtacggcaaactgtttgatttcatcactgcaaag
aagcttcgcgtcaagaatcgcggcaagagcgacaagctcacttacgacgaagactttggt
gacagcgatcaagaagacgaaccggatgcttacttggcgcgagttaaggcggaagcggag
gagcgtgacggtgtggagaatcaagattccgaggaagactcgaccgacgaggacttcaat
ccaaatcaagatgaaagcgacgttgcggaggagtacgacagcaatcccaacagttccgaa
agcgaagaagactcagacgcatctgaggctagtaacaaaaaaaagaaaaaggagaagaag
gaaaaaaaacccaaatcggcgaaaacggtgtcagaaaagccgcgaaaacgaaggaaaccg
aagaaggagaaagatgcgaataagccgaagaggccgccaacggcgtttatgctgtggctt
aacaatgcgcgcgagagtatcaaggccgagaatcctggaatagctgtgacagaaatcgcg
aagaagggtggagaaatgtggcgagaactcaaggataagtccgaatgggaagcaaaggca
gttaaggctaaaaaagagtatgcggcgtcgatgaaagaatatgaagcgagcggtggcggt
aaatctaaagagaaggaaaagacggagaaaaagaaggaggtgaagaaggagacgaagaag
gaggtgaagaaggagacgaagaaggaatcacctggcaagttaatgagtggcacttctttc
aagagtaaagagtatatcagtgatgacgacagtagcagcgatgagagtaagaagtctgaa
aaaaagtcgcccgacgaaaatgaggaaaaggaggaaaaggagaaaaagaagaaaaatgag
aaacgagctgcaaaggataccggaaagaaagtagtgaagaagcgtaaacaagatcagtcg
gatgatggagaaagcgatacggaagaacccacggagagcactccgccgtcgtccgacgca
gattctaaagacagtgattaa
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