Linepithema humile (Argentine ant): 105667516
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Entry
105667516 CDS
T04898
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105667516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105667516
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105667516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_33
AAA_2
RNA_helicase
AAA_28
Mg_chelatase
Rad17
AAA_18
nSTAND3
IstB_IS21
AAA_17
ABC_tran
NACHT
TsaE
ATPase
Zeta_toxin
AAA_7
Parvo_NS1
Vps4_C
Cytidylate_kin2
Sigma54_activ_2
DUF815
AAA_11
Motif
Other DBs
NCBI-GeneID:
105667516
NCBI-ProteinID:
XP_012214771
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MQKVGKLNSSIDIIPIQGSSSDYRSRYINKLRMDQRLFRDQSLIARVQTYMHENENKVYI
DVNEMADALQKRYRDYRGKKRGTFRAMVRKAYDELTEIFSRKPTTRECAAYDDDDFEDVD
VELDSQRTSIGDMLLHMYNKSSYTQNGNSSDKELIDISSDDDVSKMESKIEKNVKASEPV
CNVNEDSLHTSATVISKAEIAISQSAISIPKPETSVTKPETSITKPETLAIKSELPVKSK
NLVNEVIKQPLIESARKRQRDKENDSGQFSIAKKAKSIPVTEPKVTFSDVGGSDKILRTV
CKLLAHIKHPEIFKQLGISPPRGFLLHGPPGCGKTLLAHAVAGELNIPLLKVAGPELVAG
VSGESEARIRELVEQALSLAPCIIFIDEIDAVAPHRATAQREMERRIVAQLLSSLDELNF
KENGDRVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDREARARILAVHTEKVVLAPNV
SLSTIASLTPGFVGADLVALIREAAMAAVDRIFEDLNRSRQEQKLPEISSEIDKKSNKET
HTSKDSGNLINQNTSVPTTEVPTTTVQNDTAFLRDVSKTPVTLDNTEMDIIQEHSSDLSS
LLGWLHSELSLSAKHLSTLCIEHSDFEIALRVVQPSAKREGFATVPDVTWDDVGSLQDVR
QELQMAILAPIKHSEQFNALGLTAASGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPE
LLNMYVGESEKAVRQCFLRARNSAPCVIFFDELDALCPKRTEGDHSATSRVVNQMLTEMD
GVEDRQGVFLMAASNRPDIIDPAVLRPGRLDKILYVGFPTASDRVDILRALTKNATKPKL
ASDVNLEQVGYHDKCQGYTGADLAALIREAGMEALKEIIAGYGHSEISMRHIFRAFDKIQ
PSVREKDIKHYEKLSKLYSVKKSSEITPMETPIETPIDAPIVDVIMESMET
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagtgggtaaattaaattcatcgatcgatatcattccaatacaaggatcaagc
agcgattacagatcgagatacataaataagctcagaatggatcaaagattgtttcgagat
caatcactaattgcacgcgtacaaacgtatatgcacgaaaacgaaaacaaagtatatatt
gatgtcaatgaaatggcagatgcattgcaaaaacgatacagagattatcgtggtaagaag
cgtggtacgtttcgtgcaatggtacgtaaagcttatgacgaactcacagagatattctca
aggaaacctacgacacgtgaatgtgctgcatacgacgatgatgattttgaggatgttgat
gtcgaattagattcacaacgtacttcaataggtgatatgttattacatatgtataataag
tcgtcatacacacagaatggaaattcgagcgataaggaattgatagatatcagtagcgac
gatgatgtgtcaaagatggaatctaaaattgaaaagaatgtaaaagcatctgagcctgtg
tgtaatgttaatgaagattctttgcacacatctgcaacagttatttcaaaagcagaaata
gctatctcacaatcagcaatatctattccaaagccagaaacatccgttacaaagccagaa
acatcgattacaaagccagaaacacttgcgataaagtcagaattacctgtaaaatccaaa
aaccttgtgaacgaggtcataaaacaaccattaatagaatctgcaagaaaacgacaaagg
gacaaagaaaatgacagtggacagttttcaattgcgaaaaaagcaaaatctatacctgtc
acagaaccgaaagttacattttccgatgtaggtggtagtgacaaaatcttgagaactgtc
tgcaagttactagcccatataaaacatcctgaaatttttaaacagcttggtatatctccg
ccaagaggatttttacttcatgggcctcccggatgtggaaagacattactagcacatgca
gttgcaggagaattaaacatacctctactaaaagtagcagggcctgagcttgtggcagga
gtatctggtgaaagtgaagctcgtattagagaattggttgagcaagctttaagtcttgca
ccatgcatcattttcatagatgaaatagatgctgttgcaccacatagagctacagctcaa
agagagatggaaagaagaattgttgcacaattattgtcaagcttagatgaattaaatttc
aaagaaaatggagacagagtactggtgattggtgcgacaaatcgacctgattcattagat
cctgctttaagaagagcgggacgttttgatcgtgaagtatgccttggcataccagacaga
gaggcgagggctagaatcttagcagtgcatactgaaaaagttgtattagctcctaatgtt
agtttgtcgacaatagcttccctcactccaggttttgtaggtgcagatttggttgcctta
attagagaagctgccatggctgctgtagatagaatatttgaggatttaaatagatcaagg
caggaacaaaaattacccgaaatatcatccgaaatcgataagaaatctaacaaggaaact
catacttccaaagattcgggaaatttaattaatcaaaataccagtgttcctacgacagaa
gttcctactactacggtacaaaatgataccgcgttcctaagagatgtatccaaaactcct
gtaactttggataatactgaaatggacataatacaggaacactcatcggatttgtcaagc
ttattgggttggttacacagcgagctttccctttccgcaaaacatctatcaaccttgtgt
attgagcatagtgattttgagattgctttacgcgttgttcaaccttcagcgaaaagagaa
ggatttgcaacagttcctgatgtaacctgggacgatgttggctcattgcaagatgtacga
caggaactgcaaatggcgattctcgctcccattaagcactctgaacaatttaatgcatta
ggtttaactgctgctagtggagtattgttatgtggtccacccggatgtggaaaaactttg
cttgccaaagctattgctaatgaagctgggattaattttatttccgttaaaggacctgaa
cttttaaatatgtatgttggcgaaagtgagaaagcagttcgtcaatgtttcttaagagca
agaaattcggcaccgtgcgtcatattctttgatgaattagatgcattatgtcctaaaaga
acagaaggtgatcattctgcaacatcacgtgtcgttaatcaaatgcttacagaaatggat
ggtgtcgaggatcgacaaggtgtatttcttatggccgctagtaatcgccctgacataata
gatccagctgttttgagaccaggaagactcgacaaaattttatacgttggtttcccaaca
gcttcagatagagtcgatattttacgtgcattaacaaaaaatgcaacaaaaccaaaactt
gcatcagacgttaatttggagcaagtgggatatcacgacaagtgtcaaggttatactgga
gcagatttagcagctttgataagagaagctggtatggaagcgttgaaggagataatagcc
ggttatggacactcagaaatttctatgcggcacatctttcgagcattcgataaaatacaa
ccgtctgttcgcgagaaggatattaagcattatgaaaagttgagtaagctgtattcagtt
aagaagagttctgagattacaccaatggaaacaccaatagaaacaccaatagatgcacca
attgttgatgtaattatggaatcaatggaaacttga
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