Linepithema humile (Argentine ant): 105667892
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Entry
105667892 CDS
T04898
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105667892
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105667892
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105667892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
Ribosomal_L34e
Motif
Other DBs
NCBI-GeneID:
105667892
NCBI-ProteinID:
XP_012215430
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All DBs
Position
2:complement(25123854..25269449)
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AA seq
670 aa
AA seq
DB search
MFSDSRTPRLAAHQFLSAHEENMDNSAYVPNHLPPPSLVVFSQAGGLPEALRMQRPFNPQ
VTDSKELQVPFSTAASLGYGLHHMLHLPPQFLHPLEHRLPFGGFRPLVPSAFAPPSKCLK
VETGNGAVPGSGGLPSIGSLSSMSNMFSPSSLPGAGGGAVVSVSGAAAAAAAAAAAAGQE
VGGPQSPAGSASRSPTGTGGTGSGPNRGATPDEEDRDANATPGSENTERSTPEEGRPYRL
GPVFGGRCGAEALGLGLGLPPGPAYRFALPPGLAAKTTRCLVFDQGKKKFPSDPSCCPVC
GVTVRPQELEQHFAQELDRLYKITSASTRPRPPRSTLPPTHPQDHPHGPMLHAPSAADGT
PQGRWETYKRIKANRQARIRVKNRKRKADEASCPVCSERLSGTPEELNQHVDRCLNKQNN
GNPAGQNANLDEEEVDVEGDAETFEEYEWAGQRRVRATSMLVGGFSAAGLATSSSNRSGG
GAGGGGGNQEDEDVDLVVDGDDAAEFGPAQYSEADVVALRIDGTPREQKERDALREAVIS
PNAPHTPQQLTPDSGLTTQGLVEVKPEPGAATPVGQQNDPEEGASASPRRDGDTPVVDAL
RGRIRELEAEMRGQPFKCLICMEQYKKPVTSVCCWHVHCEQCWLHTLGAKKLCPQCNMIT
SPSDLRRIYM
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggacagccgcacgccgcggctagccgcgcatcagtttctcagtgcacacgag
gaaaacatggataattctgcgtacgtaccgaatcatctaccaccgccgtctttggttgta
ttctcgcaggctggagggttacctgaggccctgagaatgcaaagacccttcaatccacaa
gtgaccgattcgaaggagctgcaggtgcccttcagcacggcggcatcgctgggctacggg
ctgcatcacatgctgcatctgccgccgcaattcctgcacccgctcgagcatagactgccc
ttcggcggcttccggcccctggtgccgtccgcgttcgcgccccccagcaagtgcctcaag
gtcgagaccgggaacggcgcggtgccgggaagtggcggcctgcccagcatcggctcgctc
tcgagcatgtcgaatatgttctcgccctcgtctctaccaggcgccggcgggggtgcggtg
gtgtccgtttcgggtgcggcggccgccgcggccgccgccgctgctgctgccggacaggaa
gttggcgggccgcagagtccggccggttccgcgagccgttcgcctaccggcaccggtggt
accggttccggtccgaatcgtggtgcgactcctgacgaggaagaccgcgatgccaacgcc
acacctggatccgaaaacaccgagcgatccaccccggaggaaggacgaccgtacagactg
gggcctgtgttcgggggccgatgcggcgcggaggcgctcggtctggggctggggctgccg
ccgggcccggcctacaggttcgctctgcccccgggactcgctgccaagaccacccgctgc
cttgtattcgaccaaggcaagaagaaatttccctcagacccatcttgctgtccggtgtgc
ggtgtgacagtgagacctcaagaattggagcagcattttgctcaagagcttgatcgactg
tataaaatcacctcggcgtcgacaagacctcggcctccaaggtcaactttgccgccgacg
catccccaagatcatcctcatggcccgatgctgcacgccccgtcggcggcggacggcaca
ccccaaggcagatgggagacgtacaaaaggatcaaggctaatagacaggcaagaatacgc
gttaagaaccggaagaggaaagcggacgaagcgtcctgtccagtttgcagcgaaagattg
tcgggcaccccggaagaattgaaccagcacgtcgaccggtgtctgaacaagcagaacaac
ggcaacccggccggacagaatgcgaatctcgacgaagaagaggtcgacgttgaaggcgat
gccgagaccttcgaagagtacgagtgggcaggccagagaagagtacgcgccacttctatg
ctcgtcggtggattttccgccgcagggctcgccacctcctcgagcaatcgttccggcggc
ggtgccgggggcgggggcggtaaccaggaggacgaagacgtcgacctggtggtcgacggc
gacgacgctgccgagttcggtccggcgcaatattccgaggcggacgtcgtcgcgctgcga
atcgacgggacgccgcgagaacaaaaggaacgcgacgctcttcgcgaggctgttatctca
ccgaatgcgccgcacacgccgcaacagttaaccccggattcgggattgacgacgcagggc
ctggttgaggtgaaaccagaaccaggcgccgcgacgcccgtcggtcagcagaacgatccc
gaggagggagcatctgcgtctccaaggagggacggtgacacgccggtcgtcgacgccctt
cgcggtcgcattcgtgaactcgaggccgagatgcgcgggcaacccttcaagtgtctcatc
tgcatggaacaatataagaagccagtcacttcagtttgctgctggcacgtacattgcgag
cagtgctggctgcatacgctgggcgcgaagaagctctgtccgcaatgcaacatgataacg
tcgccgtccgatctgcggcgcatctacatgtaa
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