Linepithema humile (Argentine ant): 105668145
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Entry
105668145 CDS
T04898
Symbol
Polr1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105668145 (Polr1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105668145 (Polr1B)
Enzymes [BR:
lhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105668145 (Polr1B)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105668145 (Polr1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
105668145
NCBI-ProteinID:
XP_012215797
LinkDB
All DBs
Position
5:complement(15095304..15101324)
Genome browser
AA seq
1120 aa
AA seq
DB search
MSNEPKLTNTSPDFGKPPENQNDLLQSLGVPHVDSFNYMLEDGIFQGIKDSTPVYLTLPN
DDKIVLWLDDVHIYKPTVPSGTIGVKNCKIYPTECRQRGTTYKGKITVRIGWSVNGKEQE
PLEKDLGEVPIMIKSNRCHLNKMSPEELVTHGEHEQEWGGYFVIKGLERLVRMLVMTRRN
YPIAIKRSTWKTRGTQFSDLGISLRSVRDDNTATNNTLHYVTDGSAKLAFTYKKATYYVP
LVMMLKCLIDVTDLYIYKALIAGYEDDLYYNNCIMNMLRALHEEDLHWHEQCKAHIGKIF
RIKFTELPQDASDIDVCDYIIKHCVAIHLDDPADKFYFLVFMTKKLFAFIDNKCVVEGAD
AVMMQECLLGGHLYLQVLKEKLCSWLAGLKFYILKRAKSAGNRYTLNMQEMLNVTKNRSN
IDSQMEYFLSTGSIKSSTGLGLMQSSGLTIIVENINRMRYMSHFRAIHRGAFFQEMRTTE
ARQLLPDAWGFICPIHTPDGAPCGLLNHLTMNCIVTKHPNPKLKAAIPIALVDLGMVPLS
IADNWKGSYTVMLDGKLIGLIEDKIINKVVYKLRLLKIKGHEVPSTLEIVLVPKKKVSAQ
YPGLFLFTNAARMMRPVINLATQKIELIGTFEQIYLDICVVPQEAYDGITTHQEISQTTI
FSNLANLIPLPDCNQSPRNMYQCQMGKQTMGTPCHNWQQQSQTKLYRLQTPAAPLFRPVH
YDKINMDDFPMGTNAIIAVISYTGYDMEDAMVINKSSFERGFGHGSIYKSEFVDLNDKKS
YFARNPDKPELVKTLDADGLPILGNMIKEGDVYYCYYDADNGHYVSGTYKSSETAYIDSV
KLCGTLNSHDLRRACITFRIPRNPTVGDKFASRAGQKGILSRLYPTEDLPFTETGMVPDI
IFNPHGFPSRMTIAMMIEVMAGKSAAVHGLVHDATPFRFDEDNTAVDYFGKLLELGGYNY
FGSERMYSGIYGCEMTASIFFGIVHYQRLRHMVSDKWQVRSTGPIDMLTRQPIKGRRRGG
GVRFGEMERDALISHGCSYLLQDRLFHCSDKVTTLACVTCGSLLSPELIVKGKSDNDDAK
CRLCGKEDSISEVEIPYIFKFLVTQLASCNINVKLKFRKI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaacctaaattaacaaatacgtcgccggactttggcaaaccacctgagaat
cagaacgatttgttgcaatctttaggtgtaccccacgttgattctttcaattacatgcta
gaagatggcatttttcaaggcataaaagacagtacaccagtgtatttaactctccctaat
gatgataagatagtcctttggttggatgatgtgcatatttataaacctactgtaccttct
ggtacaattggtgtaaaaaattgtaaaatatatccgacagaatgtcgacaaagaggtacc
acttataaaggcaaaataacagtgagaattgggtggtctgttaatggtaaagaacaagaa
cctcttgagaaggatttgggagaagttccaattatgatcaagtctaatcgatgtcatttg
aataaaatgagtcctgaggaattggttactcatggtgaacatgaacaagaatggggtgga
tattttgtaatcaaaggattggaacgattggttcgcatgttagtaatgacaagacggaac
tatcccatcgctatcaagagatcaacctggaaaactcgtggcacacaatttagcgatttg
ggtatttctttgagaagtgttcgggatgacaatactgctactaataatacgctgcattat
gtgaccgatggttcagcaaaattggcatttacttacaaaaaagctacatattacgtacca
ttggtaatgatgttaaaatgtttgatagacgtgactgatttatatatttataaagcatta
attgccggttatgaagatgatctctattacaataattgtattatgaatatgttacgtgcc
ctgcacgaagaagatctgcattggcacgaacaatgtaaagcacacataggaaaaatcttt
agaataaaattcactgaattacctcaggatgcatctgatatagatgtttgtgattatatt
attaagcattgcgttgccattcatcttgatgatcctgctgacaaattttattttcttgta
ttcatgacgaaaaaactgtttgctttcatcgataataaatgcgtcgttgagggtgcagat
gctgtgatgatgcaagaatgtttgctaggtggacatttgtatctgcaagttctcaaagag
aaattgtgctcttggttggcaggacttaaattttatatcctcaaacgtgccaaaagtgcc
ggtaatagatacactttaaacatgcaagaaatgttgaatgtcaccaaaaaccggagcaac
attgactcgcaaatggaatattttttatctaccggaagcataaaatcatcaacaggttta
ggtcttatgcaaagttctggacttacgattatcgtggaaaatatcaataggatgcgttat
atgagtcattttcgtgcaatacatagaggcgcgttcttccaagaaatgaggaccactgaa
gccagacaattgttgcctgatgcgtggggatttatttgtcctatacatactccagatggt
gccccatgcgggttgcttaatcatctgacaatgaattgtattgttacaaaacatccaaat
ccaaaattgaaagctgcgataccaatagcactggtggacctcgggatggttccgttatct
atcgcggataattggaagggttcgtacactgtaatgttagatgggaaattgatcggccta
attgaggacaagattattaataaagtagtgtacaaactaaggctgcttaaaataaaaggt
cacgaagtgccatcaacattagaaattgtactggtgccaaagaagaaagtttcagctcaa
tatccaggattattcttatttactaatgcagctagaatgatgagaccagtaatcaattta
gctacgcaaaagattgaacttatcggaacatttgaacaaatttatttggatatttgtgtg
gttcctcaagaagcctacgacggaatcactactcatcaagaaataagtcagacaactatt
tttagcaacttggctaatctcattccattgccggattgtaatcagagtccaagaaacatg
tatcaatgtcagatggggaaacaaacaatgggcacaccatgtcacaattggcaacaacaa
tcacaaacgaaattgtacaggctacagacgcctgctgcgccactctttagaccagtacat
tacgataaaattaacatggacgactttcccatgggtaccaatgcaataatcgctgttatc
tcgtacacgggatatgatatggaagatgcgatggttatcaataaatcgtcgttcgaacgc
ggcttcggtcatggatcgatctacaagtccgagtttgttgacttgaatgacaaaaagagt
tatttcgctcgaaatccagacaaacctgagctcgtgaaaacgttagacgccgacggtttg
cctatactgggtaacatgattaaggaaggtgatgtgtattattgttattacgatgctgac
aatggccactatgttagtgggacatataaaagctcggagaccgcttacatcgacagtgtg
aagttgtgcggcacattaaacagccatgatctccgaagggcgtgtattacattccgtatt
cccagaaatcccaccgttggtgataaattcgcatcaagagcaggacaaaaggggattctg
tcgcggttgtatcccaccgaggatttaccgttcacagaaaccggcatggttcctgacatt
atattcaatcctcatggtttcccaagtcgtatgacaatagctatgatgattgaagtgatg
gctgggaaatcggcagctgtacacggattggttcacgacgccacgccgtttcggttcgac
gaggacaacacagctgtagattatttcgggaaattattagagctcggtggctataattat
ttcggttccgaaagaatgtattcgggtatatacggatgcgagatgaccgccagtattttc
tttggcattgtccattatcagagattgcggcacatggtctcggataagtggcaggtaaga
agtactggaccgatcgacatgctgacaagacaacctatcaaaggtcgtcgacgcggcggt
ggtgttcgatttggagagatggaacgagatgccttgatctctcatggttgctcgtacctt
cttcaagaccgccttttccactgctctgataaagtaacgactttagcatgcgtgacatgt
gggtcactgctcagcccagaattaattgtgaaaggtaaaagcgacaacgacgacgcaaag
tgtcgtttatgtggtaaagaagactccataagcgaggtcgaaataccgtatatctttaag
ttccttgtaacacaactagcttcctgtaacattaacgttaaattgaaatttagaaaaatt
taa
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integrated database retrieval system
