Linepithema humile (Argentine ant): 105668306
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Entry
105668306 CDS
T04898
Symbol
Dscam1
Name
(RefSeq) cell adhesion molecule Dscam1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lhu04515
]
105668306 (Dscam1)
Cell adhesion molecules [BR:
lhu04515
]
Immunoglobulin superfamily
DSCAM family
105668306 (Dscam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Dscam_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_6
C2-set_3
Ig_4
Motif
Other DBs
NCBI-GeneID:
105668306
NCBI-ProteinID:
XP_067215050
LinkDB
All DBs
Position
7:5238628..5309738
Genome browser
AA seq
2088 aa
AA seq
DB search
MWREPPGGGCKTSTHVIAMLLLAVLALTTVVLAEDESMGPVFVKEPPNRVDFSNGTGAVV
ECQARGNPQPDIIWVRADGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLA
RSPAGSVHSRDVNVRAVVTQPYNPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIRED
GEVYLQEDPALGQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRL
VITEPTSNVAPRIAGERYEGGKLVDVPKTSKAALDCETQGFPVPLTRWYKFIEGTSRRQP
VQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLNAEIEPSTQT
IDFGRPATFTCAVQGNPIKTISWLKDGKPLGLEDRVLRIESVKKEDKGMYQCFVRNDQES
AQATAELKLGGRFEPPQIRQAFTEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTE
RLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMD
KKAIVAGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERLSDQAT
YTCVARNAQGYSARGTLEVQVMVAPEIAPFVISEKPANWGETVTATCTILKGDQPVQIEW
ALNDQPISHDFSDITVVTSKRVSLLTIDAVTASHAGEYTCVASNAAGGTSFSASLAVNVA
PHIGPFAISDGPANWGDMVSATCSIMKGDFPVKIVWKFNGKPISAHDTDITITRINKHMS
ALSIESVAARHAGEYTCVATNKAGDVSHSTILAVNVPPRWILEPTDKAFAQGSDARVECK
ADGFPKPQVTWKRAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGYYLCEAVNGI
GSGLSAVILISVQAPPQFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKS
DPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYG
LKVLDKSGRSVQLSWAAPYDGNSPMKKYIIEYKISKGSWEADMDKVYVPGTHQNVAGVYN
LRPATTYHLRIVAENGIGFSEPSDTVTIITAEEVPSGPPTSVKVEALDQHTLKVTWKPPP
REDWNGEILGYYVGYRQSADKPYMFETVEFSKEDTKEHHLQIMNLKTYTQYGVVVQAFNK
IGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRVSWMSPPLSAANGVITGYKVIYG
PSDTWYDENTKDTKITASSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAP
EAPIAIKALVMSAESILISWRPPSQPNGVISQYTVYTKADNAEEPTSQKVPPNQLTHEAS
GLDKQLRYEFWVTASTNIGEGEASKIVTLGPSARVPAKIASFDDKFTATYKEDVKLPCLT
VGVPAPEVTWKVRGAILQPSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENNFGHDTVTHQ
LVVHAPPHSPQVTLTATTTNTLTMKLRPHPTDNAPIHGYTIHYKPEFGDWETVQISSTAQ
KYTIENLWCGSRYQIYVTAYNGIGTGDPSDILNTRTKGSKPIIPEASRFIEVSTNSITLH
LNAWSDGGCPMLYFVVEHKKKHQQEWIQVSNNVKPGANFIVLDLDPASWYHLRVTAHNNA
GFAVAEYEFATLTVTGGTIAPARELPDVNGEGNDDPMKIFMANLNLVVPVIAAILVIIVA
VIVICVLRGKGHSGDKDDVVYQQTGVGGATLDKRRSDLRDELGYIAPPNRKLPPVPGSNY
NTCDRIKRGTVISGTGSVRSHSTWDPRRHMYEELNHYVPRRCPPPPRIGSADGLSHRGME
DEICPYATFHLLGFREEMDPSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQS
MPRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQYGAPYDHYGSRGS
VGRRSVGSARNIPVSGSPEPPPPPPRNHQDQNNSSFNDSKESNEISEAECDRDQLVNRNY
GVNARNKDGMTTEEMRKLIERNEAPGRQTGSPHGGHGGLFTPYDTVAV
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgagaaccaccaggcggggggtgtaagacatccacccatgtcatcgctatgctc
ctgttagctgtcctggcattgacaaccgttgttttggctgaagatgaatctatgggaccg
gtgtttgtcaaggaacctccgaaccgagttgatttctcaaatggaactggagctgtggtt
gaatgccaggcgagaggaaatcctcaaccggatatcatttgggtgcgagccgacggaacc
gccgtaggagatgttcccggactgagacaggttctgccgaacggaaatttggtgttccct
cctttccgcgccgaggattatcgtcaggaagttcatgctcaggtctacagctgtttggca
cgttcccctgcgggttcggttcacagccgtgatgtcaacgtgagagctgtcgtcactcaa
ccttacaatccggagatcttgaccgaatacgttataagaggaaacagtgcgatcttaaaa
tgcagcatccccagttatatcgcagaatttgttactgtcgaggcgtggattcgcgaagat
ggagaggtctaccttcaggaggatcctgcgctcgggcaggatggaaaatacttggtacta
ccatctggagaactgcacatcagagacgtcggacccgaagatggatacaagacttaccaa
tgtcgcacgaagcacagactcacaggtgaaactaggttatccgctacgaagggacgtctc
gtcattactgaaccgactagcaatgtcgcgccacgcattgccggtgaacgttatgagggt
ggcaagctagtagatgtaccaaaaacaagtaaggcggctttggactgcgagactcagggt
tttcctgtcccattgacaagatggtacaagtttatcgaagggacgtcaagacgtcaaccg
gtccagttgaatgagcgcgtacgtcaagttagcggcactctaataatccgtgaggcacgg
gtcgaagattccggtaaatatctctgcattgtcaacaattccgtcggcggcgaaagcgtg
gagactgttttgactgttacggcaccattgaacgcggaaatcgaaccgagtacgcagact
atcgattttggaagacccgcgaccttcacctgcgccgtccaaggcaatccgatcaagacc
atttcctggcttaaggatggaaagccccttggattggaggaccgcgtgctgagaattgag
agcgtgaagaaggaggataaaggaatgtaccaatgcttcgttagaaatgatcaggaaagc
gcgcaggcaacggcagaattaaaacttggtggaagattcgagcccccgcagattcgtcaa
gcttttaccgaagagactcttcagcctggaccgagcatgtttttgaagtgtgttgccagt
ggaaatcctacccccgaaattacctgggaacttgatggaaaacggctgtcgaacaccgag
agattgcaagtgggacaatacgtcacggtcaatggtgatgtcgtgtcgcatctaaatatt
tcgagcattcataccaatgacggtggactttacaagtgcattgctgcatcaaaggtcgga
tccgctgagcattccgcccgcctcaacgtttatggtttgccgttcattcgccacatggat
aagaaggccatcgttgctggagaaactctgcgtgtcacctgtcccgttgctggatacccg
atcgagagcattgtctgggaacgagacaccagagtcctgccgatcaacagaaagcaaaag
gtcttccccaatggcacactcatcatcgagaacgtcgaacgattgagtgatcaagcgact
tacacctgcgtagcacgcaatgcacaaggttacagcgcacgcggaacactagaagtacaa
gtcatggttgctccggagatagcgcctttcgtgatcagtgaaaaaccagcgaattgggga
gagacagtcactgcgacgtgtaccattctgaaaggagatcaaccggtacagatcgagtgg
gcgctcaatgaccagccgatctctcatgatttttccgatataacagtcgtcaccagcaaa
cgcgtcagcctgctcacgatcgacgccgttacggcgagccacgccggagaatacacttgc
gtagccagtaacgccgccggcgggacgagcttttccgcttccttagctgtcaatgttgca
ccacacatagggcctttcgcgatcagtgatggaccggcgaattggggagacatggtttcg
gcgacatgttctattatgaaaggcgactttcccgtaaaaattgtttggaagtttaacggc
aaaccgattagcgcgcacgatacggatatcacgatcacgaggataaataagcatatgagc
gctctcagcatcgaatccgtggctgcgaggcacgcgggcgagtacacgtgtgtagctaca
aacaaagccggcgacgtcagccattcgaccatcctcgccgtcaacgtacctcctcgttgg
attctggagcccaccgacaaagcattcgctcaaggatctgacgcacgagtcgaatgtaaa
gccgacggattccccaagcctcaagtcacatggaagcgtgctgctggggatacgccggga
gattatactgacttgaaactgagcaatcctgacattagcgtagaggatggtactctctcc
attaacaacatccaaaagacgaacgaaggctattatctttgcgaggctgttaacggcatt
ggatcaggcctgtccgctgtcattctcatttcggttcaagctcctcctcaattcgaaatt
aaactgaaaaatcaaaccgctcgccgtggagaaccggctgtattgcaatgcgaggcgcaa
ggagagaaaccaattggcattttgtggaacatgaacaacaagaggctggacacaaagagc
gatcctcgttacactatccgcgaagaaatcttggccaatggagtattgtccgatctgagc
atcaaacgaaccgaaaggagtgattccgccttgttcacttgcgtagccactaatgccttt
ggtagcgatgacactagcattaacatgatcgtgcaagaggtgccggaagtaccatatggt
ctcaaggtgctggataaatcaggacgttcagtgcaattatcatgggccgcaccttacgac
ggaaacagccctatgaaaaaatacatcatcgagtacaagatcagcaagggttcttgggaa
gccgatatggataaagtgtacgtaccaggcacgcatcagaacgtagccggagtgtacaat
ctgagacccgcaactacatatcatctgcgaatcgtcgctgagaacggaattggcttctcc
gaaccgtctgacacagtcaccattatcactgccgaggaagtacctagtggaccaccaacc
tctgtcaaagtagaggctctcgatcagcacacactcaaggtaacatggaaaccgcctccg
cgcgaggattggaacggcgagattcttggctattatgttggatacagacaatcagcggac
aagccttacatgtttgagactgttgaattctccaaggaagacacgaaggaacatcatctg
caaatcatgaatctcaagacttacacgcaatatggagtggtcgttcaggcgttcaacaag
atcggctccggaccgatgagcgaggaacgcaggcagcacaccgcagaaggcgtacccgag
caaccacctcatgacaccacctgcacgactcttacctcgcagactatccgagtgtcctgg
atgtcgccacccttgagcgcggccaacggcgttatcaccggctacaaagtcatctacgga
ccgtctgacacatggtacgacgagaatacgaaggacaccaagatcacggcttccagcgaa
actatcctacacggtctcaagaagtacacgaattacagcatgcaagtcttggctttcact
tctggtggagacggcgttaagtccgcaccgattcactgccaaaccgaacaagatgcccct
gaagctccgatcgccatcaaagctctggtcatgtccgcggaatcaattctgatttcatgg
cgcccgccgagccagcctaacggagttatttctcaatatactgtttacacaaaagccgat
aacgcagaggaaccaactagccagaaagtaccgccgaatcaacttactcacgaagcgtct
ggattagacaagcaactcagatacgaattctgggtgactgctagcacaaatatcggcgaa
ggtgaagcttctaagatcgtaactcttggaccaagcgctcgagtaccggccaagatcgcg
tcgtttgacgacaaattcactgcaacatataaagaggatgtaaaactgccatgcctcacc
gttggcgtaccggcaccggaagtaacatggaaagtacgcggtgctattctgcaaccaagt
gaccgattaagacaattgcctgagggatcattgttcattaaggaagtcgaccgtacagat
gctggcgaatattcttgctatgtagagaacaattttggacatgataccgtgacacatcag
ctggttgtacacgctcccccgcactcgccgcaggtcaccctcaccgctacaaccactaat
accttgacgatgaaattgcgcccgcatcctaccgacaatgcgccaattcacggttacacg
attcattacaaaccggagttcggtgactgggaaaccgttcaaattagttccacagcacaa
aaatataccatcgaaaatctgtggtgcggctcccgatatcagatctatgtcacagcttac
aacggaattggaaccggcgatccttcggacatcctgaatacgcgcaccaagggctccaaa
ccgattattcccgaagcgtcaaggtttattgaagtatccacgaatagcatcactctgcat
ttgaacgcctggtcggacggtggttgtcccatgttgtacttcgttgtggaacacaagaag
aagcatcagcaggaatggatccaggtctcgaacaacgtcaagccgggcgctaatttcata
gtattagatctcgatcccgcgagctggtatcatttgcgcgttacggcacacaacaatgct
ggcttcgccgttgccgaatacgaattcgcaactttgacggtgactggcggcaccattgca
ccggcccgcgagctaccggacgtgaacggtgaaggcaacgacgacccgatgaaaattttc
atggctaacttaaatctggtcgtgccggtgatagcagccattctcgttataatcgttgcc
gtcatcgtgatctgcgttctcagggggaagggccacagtggcgataaagatgatgtagtc
tatcagcaaaccggagttggcggcgctactctggacaaacgtagatccgatcttcgcgat
gaattagggtatatcgcaccgccgaatcgcaaactaccaccggtacccggctccaattac
aacacctgcgatcgtatcaagcgaggtacagttataagtggaactggctcggtaaggagt
cactcgacgtgggatccgaggcggcacatgtatgaggaattgaatcactacgttcccaga
agatgcccaccgccaccacgtataggcagcgcagacggtctttcacacagaggtatggag
gatgagatctgcccgtacgctactttccatctgttgggattccgcgaggaaatggacccg
agcaaggctatgcaattccagaccttccctcacccaggaaacggccactctggcaccatg
ggaccacctgtagggcatccgactaacgcttccgctcatagccgctctggatctcaatct
atgccgcgtcaaaacggccgctattctcgagtaccatcccaaggtggtggcagcggcacc
cataacgtcttctcacccgaatacgacgacccggctaattgcgctcccgaggaagaccag
tacggatcacagtacggacagtacggcgcaccttacgatcattatggctcccgcggatct
gtcggacgtcgcagtgtaggctcagctcgtaacattcctgtatccggctcaccggaaccg
ccaccgccgccaccgcgaaaccatcaggatcagaataattccagcttcaacgacagcaag
gagagcaacgagatcagcgaggccgaatgcgaccgcgatcagcttgtcaaccgcaactac
ggcgtgaatgctcgcaacaaggacggcatgaccaccgaggagatgcgtaaactcatagag
agaaacgaagctcccggccggcaaaccggcagcccccacggcggtcacgggggactcttc
acaccctacgatactgtggcagtgtaa
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integrated database retrieval system
