KEGG   Linepithema humile (Argentine ant): 105668399
Entry
105668399         CDS       T04898                                 
Symbol
Lis-1
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu00565  Ether lipid metabolism
lhu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    105668399 (Lis-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lhu03036]
    105668399 (Lis-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lhu04147]
    105668399 (Lis-1)
Chromosome and associated proteins [BR:lhu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105668399 (Lis-1)
Exosome [BR:lhu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105668399 (Lis-1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_SCAP NBCH_WD40 Beta-prop_Nup120_160 WD40_RFWD3 LisH_PAC1 Beta-prop_Vps41 Beta-prop_RIG_2nd eIF2A Beta-prop_DCAF4 Beta-prop_DCAF12 LisH Beta-prop_SPT8 Beta-prop_IFT140_1st Nucleoporin_N Beta-prop_WDR75_2nd WD_LRWD1 Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc
Other DBs
NCBI-GeneID: 105668399
NCBI-ProteinID: XP_012216186
LinkDB
Position
7:complement(5967094..5980743)
AA seq 410 aa
MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIR
LQKKVMELESKLSEAEKEFIEGAPTRGKRSPSEWIPRPPEKFSLTGHRAPINRVVFHPVF
SLIVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDVSGKLLASCSADMSIKLWDFH
QSFACVKTMHGHDHNVNSVAFMPQGDFVVSASRDKTIKIWEVATGYCVKTLTGHREWVRM
ARVSPCGELIASCSNDQTVRVWHVATKETKVEFREHEHVVECIAWAPESARASINAAAGA
DNKGAHEGPFLASGSRDKMIRVWDVGAGVCLFTLVGHDNWVRCIVFHPGGKFIVSASDDK
TLRVWDTRNKRVMKTLEAHVHFCTSVDFHKNHPYVVTGSVDQTVKIWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgaaaatggtgctgtctcaacgtcagagggaggagttaaataaggcgatcgcggattac
cttagcactaacggctatcaagatgcactcgaggcattcaagaaggaagctgatatgccg
ggggaggtggagaggaagtatggcggcctcctggagaagaagtggacctcggtcatacga
ttgcagaagaaggtaatggagctggagtccaagctgtccgaggcggagaaggagttcatc
gaaggcgcaccgacgcgcggtaagcgatcgccgtccgaatggataccgaggccgccggag
aagttcagcctgaccggacacagagcccccatcaatagagtcgttttccatccggttttt
agtctcatagtgtccgccagcgaagacgccaccattaaggtgtgggattttgagagcggc
gacttcgaaaggacgctaaaaggtcacaccgacagcgtgcaggacatcgcgttcgacgtc
tcgggcaagctgctcgcctcctgcagcgcggacatgtccatcaagctgtgggacttccac
cagtcgttcgcctgcgtgaagaccatgcacggtcacgatcacaacgtcaactcggtcgcg
ttcatgccgcagggcgatttcgtggtgagcgcctccagggacaagaccatcaagatctgg
gaagtggcgacgggctactgcgtgaagacgctcacggggcacagggagtgggtgaggatg
gcgcgggtcagcccgtgcggcgagctcatcgccagctgctcgaacgaccagaccgttcgc
gtgtggcacgtggcgacgaaggagacgaaggtcgagttcagagaacacgaacacgtggtg
gaatgcatcgcatgggcgcccgagagcgcgagagcgtcgatcaacgcggcggccggcgcg
gacaacaagggcgcgcacgagggaccgttcctcgcgtccggctcccgggacaaaatgata
cgcgtgtgggacgtcggcgccggggtgtgcctcttcaccctcgtcgggcacgacaactgg
gtgcggtgcatcgtcttccatcctggcggcaagttcatcgtcagcgcgtccgacgataag
acgctgcgagtctgggacacgcgcaacaaacgagtgatgaagaccctcgaggcgcacgtt
cacttctgcacttctgtcgatttccacaagaatcatccttacgtggtcaccgggagcgtc
gatcaaacggtgaagatttgggagtgccgctag

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