Linepithema humile (Argentine ant): 105668404
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Entry
105668404 CDS
T04898
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105668404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105668404
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105668404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105668404
NCBI-ProteinID:
XP_012216194
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Position
7:complement(3941702..3946857)
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AA seq
551 aa
AA seq
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MFLEKFFYWLLCQTKRSMNSPLCSCSYSMVVKEAEKMADENEDQWLYGDSTDGKEYTPVN
IQPEVQQNDSLLVNIQDKSQIEEDQQVEGTNGMESEIQGDADSPVGDHEESNSLNNAQEE
NMDANKNGAREVSSQEDGEAASDSDSDDDVHVVIGDIKSTPAYGSLNIKRGGLLTNASGV
PDKLNKQPGKFSIDEFETIGVINGIPAHEYNLDQLEDKPWRQPGADITDYFNYGFNEETW
RAYCERQKRMRSESGVGLVLNAGGGTGNQSSMRVPQVAITNDNSKYSGIMGPKRAGPPPG
RKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRREYSRKPGFPDMSVPPPGAGMP
PPPFDMPPPGYASEPTPFYMPETDPYYQSYEPTQDNQWGNDPTWQPTNLAIPMTEGEDDK
DMGPKTIPTMVPPTAIPPLMQPRDQRDNRDRERDRDREMDSMGRDRERDKERDRDRDREK
DSMIRDRDRESMTRDEDRERDRSRSQYRHKDRHRHRSRSRSRRHKSRSRSPSRRKKKSRR
SDRERSKEESE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtttctagaaaaatttttttattggctattatgtcagacaaaacgcagtatgaattct
cctctatgttcatgttcatacagtatggttgtcaaagaagccgaaaaaatggcggacgaa
aacgaggatcagtggttatacggagattcaactgatggaaaagaatacactccagtgaat
attcaaccggaagttcagcaaaatgattcattgctcgttaacattcaagacaaatcccaa
attgaggaagaccaacaagtggaaggaactaatggaatggagtctgagatacaaggtgat
gctgattctcctgttggtgatcatgaggaatccaattcgctaaataatgcacaagaagag
aatatggacgcaaataaaaatggggcaagggaagtctctagtcaagaggatggtgaagca
gctagtgattctgactctgacgatgatgtgcatgttgttatcggcgatatcaaatcaaca
cctgcatatggtagtttaaatatcaagagaggaggactgctaactaatgcatccggagta
ccagataaattgaataaacaaccaggaaagttcagcatagatgaatttgaaactattgga
gttatcaatggaataccagcccatgagtacaatttagatcaattggaagataagccatgg
agacaacctggtgcagatatcacagattactttaattatggctttaatgaggagacctgg
agggcatattgcgaacgtcaaaagcggatgcgaagtgaatccggagtgggattggtttta
aatgcaggaggtggtactggcaatcagagtagtatgagagtaccacaagttgcaataact
aatgacaacagcaaatattctggtattatgggtcctaagagagcaggtccaccaccagga
agaaagatggctggcactatagatgttattggaagttctggattggcctccagaagaaat
ttggacaagtctccaccaaaaggaaatgttatacaagtcatgaccgccgataggagagag
tattctagaaaaccaggttttcctgatatgagtgtaccgcctcctggagcaggaatgccg
ccaccaccgtttgatatgcctccaccaggatatgccagtgaaccaacaccattttatatg
ccagaaactgatccatattatcagagttatgaacctacacaggataaccagtggggcaat
gatccgacgtggcagccgacaaatctagcaattccgatgacggaaggtgaagatgacaaa
gacatgggacctaagacaatacctacgatggttccaccaacggccattcctcctttgatg
cagccacgtgatcagagagacaatagagatcgtgagcgggacagagatcgagaaatggat
tctatgggaagagatagggaaagggacaaggagagagatcgtgatcgtgacagagagaag
gattctatgataagggaccgcgatagggaatctatgactcgagatgaagatcgagaacgt
gataggtctagatcccaatatcggcataaagatcggcatcgacatcgatcaagatcgcga
tctcgtagacacaaatcgagatcgcgtagtccaagtcgacgtaagaagaaatccagacgc
tcagacagagaacgttccaaggaagaaagtgaataa
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