KEGG   Linepithema humile (Argentine ant): 105668413
Entry
105668413         CDS       T04898                                 
Symbol
Naam
Name
(RefSeq) uncharacterized protein Naam
  KO
K03679  exosome complex component RRP4
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105668413 (Naam)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lhu03019]
    105668413 (Naam)
Messenger RNA biogenesis [BR:lhu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105668413 (Naam)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     105668413 (Naam)
SSDB
Motif
Pfam: RRP4_S1 Isochorismatase ECR1_N EF-hand_1 KH_6 EF-hand_5 EF-hand_7 EF-hand_6 EF-hand_8 ECR1_N_2 EH RRP40_S1
Other DBs
NCBI-GeneID: 105668413
NCBI-ProteinID: XP_067215393
LinkDB
Position
7:9473602..9478054
AA seq 618 aa
MTEYPSINVRLAVNRVDFNLITNEGIQPRLYTPGEEISSQPDFLRGHGTYVDEGKTLRAS
VAGVLEKVNKLISIRPLKARYNGEIGDLIVGRITEVQQKRWKVDINSKLDAVLLLSSVNL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQSIFADGSLSLHTRVLKYGKLSQGIMLKVP
PMLIQRKKTHYHNLDNGVTLILGNNGYVWIGANIQNVDKSEGGFTEDLSKIPVENRNVCA
RLRNCISILAQCNMLLSDTSVTYAYEESAKYEVHELLQPEPMLRNMDACFTAFDKDGDGF
LSISEFDLICRALFRNDRGKIYGFEEDQLREVYSIFDLKHDGTIDKEEFEFCWNRWIKIC
TRPKSAFLIVDVQNDFITGSLNITQCAAQHDGSEVIEPINRLLETIPFDAGVFYSLDWHP
VDHVSFIDNLHLREVDISSSISKEAARVYDTVTFRGPPTLKQRLWPRHCVQDSWGAELHK
DLKIVDNAIKIYKGTNPEVDSYSVFWDNKKLTQTTLSSQLQAKGVTDIYICGLAYDVCVG
ATAVDALTSGYRTILIDDCSRGVDLVDIEKTKATVIASNGVIVNSSQVKAMVEGRDRRPE
LGYKLALEIKHKLNLDDE
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgacagaatatccatctattaatgttcgattagcagtaaatagggtagattttaacttg
ataacgaacgaaggcatccagccgcggctttatactcctggagaggaaatatccagtcaa
ccagactttttgagaggtcatggaacttacgttgatgagggaaaaacactacgtgcgtca
gtcgccggagtcctagaaaaagtgaacaaactcatatcaattagacctttgaaagcgcga
tacaatggtgaaattggagatcttattgtgggaaggataacagaggtacaacaaaaacgt
tggaaggttgatataaattccaagcttgatgctgttttgctattgtccagtgttaattta
cctggtggtgaattgagaagaagatccgctgaagatgaacagacaatgcgtagatatctg
caggagggagacctaatttgtgctgaggtacagtcaatttttgccgatggttcactttcg
ctgcatacgcgagtgctgaaatatggcaaactctcgcaaggaataatgctaaaagtgcca
ccgatgctgatccagcgtaaaaagacgcactatcataatttagataacggcgtcactcta
atacttggtaataacggctacgtatggattggtgcaaacattcagaatgttgataaatcg
gagggtggttttacagaagatttatcaaagattccagtagaaaatcgcaacgtatgcgcg
cggttacgtaactgtatctcaattttggcacaatgtaatatgctgctatctgatacttcc
gtaacatacgcttacgaagaatctgctaagtacgaagtgcacgaattgttacaacccgaa
ccgatgctgagaaacatggacgcatgtttcactgcttttgataaggacggtgacggattc
ctgtcgatttccgaatttgatcttatatgtcgtgcattgtttcgaaatgaccgcggcaaa
atttacggctttgaagaggatcaactacgcgaggtgtactccatctttgatcttaaacat
gatggcacgatagataaggaagagttcgagttttgctggaatcgatggatcaagatatgc
acgcgtcccaaaagtgcctttttaatcgtagacgtgcaaaatgattttataacgggttcc
ttaaacataacgcaatgcgctgcgcaacatgatggttcggaagtgatcgagcctattaat
cgattgctagaaaccataccgtttgatgcaggcgtgttttattccctggactggcatccc
gtggatcacgtatccttcatcgataatttacacctcagggaagtggacatcagcagcagt
atttcaaaagaagctgcacgagtatatgacacagtgacgttccgaggaccgccgacgctg
aagcaacgtctttggccacgccactgcgtacaggattcatggggcgctgaattgcataag
gatctcaagattgtcgacaacgcgataaagatttacaagggtacgaatccagaggtggac
tcgtactcggtattctgggataacaagaagttgacccaaacgacgttgtcgtcacagctg
caggctaaaggcgtcaccgatatctacatctgcgggctggcttacgacgtttgcgtgggt
gctaccgcggtagatgcgctcactagcggatatcgcactatcctgatcgatgattgtagc
cgcggcgtcgatctcgttgatattgagaagaccaaggctaccgtgatagccagcaatggt
gtgatagtaaactccagtcaagtgaaagcgatggtggagggacgagatcggcgaccggaa
cttggctataaactcgcactggagatcaaacataaattgaatctcgatgatgaataa

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