Linepithema humile (Argentine ant): 105668419
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Entry
105668419 CDS
T04898
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105668419 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105668419 (Vps35)
Membrane trafficking [BR:
lhu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105668419 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF3896
FerA
Motif
Other DBs
NCBI-GeneID:
105668419
NCBI-ProteinID:
XP_012216221
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Position
7:5221466..5226579
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AA seq
812 aa
AA seq
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MVSLFFSQPMTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGE
LRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDDEDG
TVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDKERREREREELRILVGTNLVRLSQLESVT
LDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPSQVPGIPQDVKLFDVFSDQIATIIQTRQDMPS
EDIVSLQVALINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKI
PVDNYKNILTVLKLEHYAPLLDYFDYEGRKSLAIYIITNILENETLIPMQEQVDAVLSMV
SPLVQDQSDQPNIEEDPEDFAEEQGLLGRLIHHFKSDTPDQQYMILSAARKHFSAGGNKR
IKYTLPPIIFQSYQLAFTYKALKDQDEMWQKKCQKIFQFCHTTITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEE
NAEPVRNQCALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGGKVLDCLKKGI
RIASQCMDTSVQVQLYVELLNHYIYFYEKGNTAVTVQILNQVIAKIREELPNLEASEETD
QIQKHLANTLEHLRNRMESPDSDGLSYQGLVL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttgtttttttcacagccaatgacacctgccataacgggaatggaagaacaa
gaaaagctgttggaagacgcaattggcgtggtaaaagtccaagcttttcagatgaaacat
tgtctagacaagtctaaattgatggatgcgctgaaacatgcttcaaccatgttgggggaa
ctaagaacttcccttctgagtccaaaaagctactatgaattatatatggcaatcacagat
gaactacgacatttagaattgtatttactggatgaatttcagaaaggaagaaaagttaca
gatctttatgaattagtgcagtatgttggcaatattgtgcctagactctatctactcatt
actgttggtttggtttacataaaaacaactcctggcttaaaaagagatcttttaagagat
ctcgtggaaatgtgcagaggcgtgcagcatccattacgtggtttatttttaagaaattat
ttactgcaatgcacaaggaatattctgccagatgttacagagggtgatgatgaagatggg
accgttcgtgacagcatagactttgtcttgatgaattttgcggaaatgaataaattatgg
gtacgcatgcaacatcagggtcacagtagagataaagaaagaagggagagagagagggaa
gaacttagaatcttagtgggaacaaatctcgtacgacttagtcaactggaatctgtaaca
ctggataaatataaaaagcttgtactgccaggaatcttggaacaggtggttagttgtagg
gatgcgatagcacaggagtatcttatggagtgtataattcaggtctttcccgatgaattt
catttacaaacattgaatgcatttctgaaatcttgtgcggaattacaaaacggagtaaat
gtcaaaaacataattatatcgttgatcgatcgcctagcagcctttagtcaacgatccgac
ggtgtaggaggacctggtagtcccagtcaagtgccaggaattccacaagatgtcaaactt
tttgacgtattcagcgatcaaatagcaactattatacagacaagacaagatatgccctcc
gaagatattgtgtctcttcaagtagctctcataaacttagcacataaatgctaccccgat
cgagtagattatgtagacaaagtcttgttcacaacagttcaaatattccaaaaacaaaat
gttgataagctggagtataatagtgccgtttcaagagaattagtgagattaatgaaaatc
cctgtagacaattataagaatatattaactgtgcttaagcttgaacactatgcgcctctc
ttggattactttgattatgagggcaggaaatcactggctatatatataataacaaatatt
ttggagaacgagacattgataccgatgcaagaacaagtggacgcagtgctttccatggtg
tctcccttggtgcaagatcaatcagatcaacccaatatagaagaagatcccgaagacttt
gccgaggagcaaggattactcggcagactaatacatcactttaaatcggacacaccggat
caacaatatatgatattaagcgctgcgagaaagcacttcagtgctggcggtaacaaaaga
ataaaatacactctgccgcccataattttccaaagttaccagttggcctttacatataaa
gcattgaaggatcaggatgaaatgtggcaaaagaagtgtcaaaaaatctttcaattttgt
cacacgactatcacggctttgatgaaagctgaattggccgaactacccttgagactattt
ctgcaaggtgcaatagcgattggcgaaattcgcttcgacaattttgagatggttgcttat
gaatttatgagtcaagcgttctcaatatacgaagacgaaataagtgactcgaaagcgcag
ctcgcggcaattaccttaatcatcgctacgttcgaacaaatgagctgttttggcgaggaa
aatgcggaacctgtacgcaatcagtgtgctttatacgccagtaaattgctgagaaaacct
gatcaatgtcgaggagtcgccacttgctcgcacatattttggtcgggaaaatccctggct
acaggcgggaaagagatgcaagaaggcggtaaggtgttagactgcttgaagaaaggtatc
agaatagcaagccagtgcatggatacatcggtgcaagtacaattatatgtagaactgctg
aatcattacatttacttctacgagaagggaaatacagctgtgactgtgcaaatattaaat
caagtaattgcaaaaattagggaggagcttcctaatttggaggcgagtgaggaaaccgat
caaatacagaaacatttagcaaacacattagaacatttaagaaatagaatggaatcgccg
gactctgatggactttcttatcaaggccttgtcctttaa
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