Linepithema humile (Argentine ant): 105668530
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Entry
105668530 CDS
T04898
Symbol
Mat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03022
Basal transcription factors
lhu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105668530 (Mat1)
09124 Replication and repair
03420 Nucleotide excision repair
105668530 (Mat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105668530 (Mat1)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105668530 (Mat1)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105668530 (Mat1)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105668530 (Mat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-P11
zf-UDP
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_4
TRAF3_RING
ALKL1_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
105668530
NCBI-ProteinID:
XP_012216380
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All DBs
Position
1:27325814..27327638
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AA seq
322 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKMLVNVCGHTLCENCVDLLFLKGSGSCPECKIPLRRTNFRV
QMFEDPMVEKEVNIRKRILRDFNKREEDFATLREYNDYLEEIETIIYNLANNIDVVETNK
RIEQYKRDNKEQIAKSKSKLGRSEYELEEMIELERQKEEERRIELVREDAEAKKKKIREK
EALIDELTFSDANAKNIVESFASAIQMQKKEVKASLPAARVTQFSTGIKFGNQGNQNYLP
MPKIEEGPLYSYTPIWQQIEGPTPPGWRELQSRGYVSHIRNESQAERAGGFKAHVACLRA
LQEAMAGLYHNPSQRQTEFTTV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcaagcgtgtccacggtgtaaaaccaccaaatatcgaaatccatcattgaaa
atgctagtgaacgtttgtggccacacattatgtgaaaactgtgtagatttactttttttg
aaaggctctggatcctgtccagaatgcaaaattccattgagaagaacaaactttcgagtt
cagatgttcgaagatcctatggttgagaaggaagtgaatataaggaaacgtattctgcga
gattttaataaaagagaagaagattttgctacattaagagaatacaatgattacttagag
gaaatcgagactataatatataatttggcaaataacattgatgtggttgaaacaaacaaa
aggatagagcaatacaaaagggataacaaagagcaaatagcgaaaagtaaatctaaactt
ggcagaagtgagtatgaattagaggagatgatagaattagagaggcaaaaggaggaagaa
aggagaatagaacttgtaagagaagacgcagaagcaaagaagaagaaaattcgtgagaaa
gaagcattgatagacgagctaacattctcggacgcgaatgctaagaatattgtggaatca
ttcgcttctgcaatacagatgcagaagaaagaagtaaaagcctctcttcctgctgctaga
gttactcagtttagcacgggtattaaatttggtaatcagggaaatcagaactatttacca
atgccaaagatagaagaaggtcctctctattcttatacgcctatttggcaacaaatagaa
ggaccaacaccgcctggctggcgagaacttcaatctcgtggatatgtttcacatatacgt
aacgagtctcaggctgaaagagcgggaggattcaaggcacatgtagcatgtctacgagca
ttgcaggaagcgatggctggcttgtatcataatccttcgcaacgacagacagaattcaca
actgtatga
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