Linepithema humile (Argentine ant): 105668653 Help Entry 105668653         CDS       T04898                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism lhu  Linepithema humile (Argentine ant) Pathway lhu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lhu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     105668653  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lhu00536]     105668653 Glycosaminoglycan binding proteins [BR:lhu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105668653 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  105668653 NCBI-ProteinID:  XP_067207978 LinkDB All DBs Position 3:complement(23449608..23465127) Genome browser AA seq 1714 aa AA seqDB search MRARDNVKWQWRMPQPSWIMYFVQLLFLILITSGLQPTTADITLRDMTKYVGNLIEATRI QEEPSVTTTQSRCRNSSFAYNISETTTLMAPISSLFPSGLPRDFSILIVAKPEANDPAPL LTIYDYSNKEQLILSLGRDINILYGIDSDDEETSISFGVDISDDEWHRLGISIKGDSVTI ILDCDRHITKKLQRNQKKMITGIVMIRQQLSGDLYLGGLEMLMIAPNPDAAYEICTAFAP NCKYLSRLDYSSSLHINGDNYEKKNETGSNKDDFYLLSHNSTTEHPTPYQVETTTTTAFV YETDSNYRQNYGIPTIDPYNGTEWNNQQNYRIPTIDSYDEEHLRRTHNKQDYIIRGPSGP RGFPGPPGTPGPPGRKGEQGHDGLPGQQGVPGPPGNVFVIPSLSRQGNEKGPDSLTEMLS QMISQHMLAMRGIEGPMGLTGIPGPQGPSGLQGQKGEPGDIGESGPRGEIGSPGNPGREG RRGRPGRDGERGLSGPPGIKGEQGPIGLPGLPGDKGERGVAGIPGEPGLPGHEGMQGEDG PPGLPGLPGEMGPRGFIGPRGFPGLPGNPGVSGNEGPPGAKGNTGPPGPPAAPGQPGPAG PIGPLGLQGPPGPIGLVGPQGKPGIPGLPGADGSPGLPGNPGIPGVKGEQGPLGPQGPVG FPGVRGVKGDDGQRGSPGERGEKGERGLEGEKGDIGAKGEPGVPGPQGIPGLEGLEGSKG FEGPRGETGSAGPPGEKGKIGMPGFAGYPGNPGEKGDRGQSGAQGSSGDKGERGSSGLQG ERGELGPRGFRGTRGRRGAEGLPGPKGDTGQPGPPGSSGEIGSPGVEGLRGFIGLPGPPG LDGKDGVSGPPGERGPIGETGPAGLPGSPGVIGPQGSTGESGPPGEPGAPGNPGLPGETG PPGEQGKEGLPGPPGLMGPKGSPGSIGLPGFPGERGLSGPPGIPGSKGEIGPVGAQGPSG DKGAQGDPGKDGQPGLEGKQGSKGKKGSIGFKGEKGESGLPGSAGHDGLPGQRGLPGPPG PVGIPGEDGDKGNIGPPGEKGFKGSQGETGPAGPQGSQGLRGEPGLTGPSGEKGLSGEIG QRGSKGEDGLIGAIGPAGPAGLSGLPGFPGEKGEIGDPGAAGPIGPPGVRGEQGRTGPRG HKGAPGPPGPEGRQGEKGDSGIPGHPGTPGIEGKQGEKGPSGAKGDDGKEGPSGPPGPRG LIGFEGPKGDVGIPGFPGPPGEPGLIGEKGEPGKDGEEGRAGDPGIPGEAGPPGKEGLPG PHGKSGPEGPAGQQGNTGLPGEKGDTGPAGAPGLQGPIGSQGPPGTLGLPGERGLPGVAG ESGRPGIPGAVGAPGIIGPAGSKGPKGDRGRRGNKGHLGDLGHVGIKGDQGEKGNKGESG VPGPEGLKGNSGPAGPVGFRGEQGSLGPLGVPGLPGPKGNAGNDGMRGNTGPPGPPGPPG LPGPSSSLEQLNFGDIIPSLLLRENESSRRKRNVSENMNEEEKFDTKFLDIYASIFNIQQ ELDQRRRPTGTRDYPVRTCRDLFYGHSNFEDGWYWIDPNLGMPDDAIYVYCNISNKGETC IFPDIHSSQMPNIPWKKENNKNDWYSRLRGGFKITYETIGAVQMNFLQLLSQEVYQNFTY TCMNSVAWYNSNNPNNGYDLSLRLLGDNDDEFSYNGFKMQVLVDGCKNRSGKTETVFLVH TKNPQQLPLIDFYPVDYGLPHQTFGFVVGPACFK NT seq 5145 nt NT seq  +upstreamnt  +downstreamnt atgcgggcacgagacaacgtgaaatggcaatggagaatgccgcaaccctcgtggattatg tattttgtccagctactgtttctaatattgattacatccggtcttcagccaacaacggcg gatatcacactgcgagatatgacaaagtacgttgggaatttaatcgaagccacaagaata caagaggaaccttccgtgacgacaacgcaaagtcgttgtagaaatagcagttttgcatac aatatttcggaaaccacaaccctgatggctcctattagttcgctatttccgtccggttta ccacgggatttctctattttaattgttgcaaagccagaagctaatgaccccgcgccactt ctcaccatctacgattatagcaacaaagaacaattgattctttcattgggtcgcgatatc aatatcctttacggcatcgattcggatgacgaggaaacgtcgatttcttttggcgttgat atttctgatgatgagtggcatcgattgggaattagcatcaaaggtgactccgttacaatt attctcgattgcgacagacatatcacaaagaagctacaaagaaatcagaagaaaatgatt acagggatcgtcatgatccggcagcaacttagcggcgacttgtatttgggaggtctcgag atgctgatgattgctccaaatccagatgcagcttatgaaatctgcactgcatttgcgcca aactgtaaatacttatcacggttggattatagttcttctttgcacattaacggagataat tatgaaaagaaaaacgagacaggctcgaataaagatgatttctaccttttgtctcataat tctacaacagaacatcccacaccttatcaagtagaaacgacgacgacaactgcatttgtg tatgaaacggattcgaactatcgacagaattatggaataccgacaattgatccttacaat ggaacagaatggaacaatcaacagaattatagaataccaacgattgattcttacgatgaa gaacatcttcgtagaacgcataataaacaagattatattattagaggcccatcaggacct cgtggatttcccggaccgccgggaacacccgggcctccaggaaggaaaggcgaacaaggt catgatggacttcctggacagcaaggtgtgcccggtccgccaggtaatgtctttgtgata ccctcgttgagtcgacaaggcaacgaaaaaggaccggactcgttgaccgaaatgctaagc caaatgatatcgcagcacatgctcgcgatgagaggcatagagggtccgatgggcctcacg ggcattccggggcctcagggaccatctggacttcagggtcaaaaaggagaacccggcgac atcggcgaatctggacctagaggggaaataggaagtcctggaaatcctggcagagagggt agaaggggtcgccctggccgagacggtgaacgtggtctcagtgggccaccaggaataaag ggcgaacaaggaccgataggattgcctggtctgcctggtgataaaggcgaacggggagtt gcgggaatacccggcgagccaggtttaccaggccatgaaggaatgcaaggtgaagacggt ccccctggtctgccgggtctacctggtgaaatgggtccgagaggatttattgggcccaga ggtttccccggactaccaggtaatcccggtgtttctggaaacgaaggcccaccaggtgcc aaaggaaacactggtccaccaggtccacccgctgctccgggtcagcctgggcctgcaggc ccgataggaccacttgggcttcaaggtccaccagggccaattggtttagttggtccacaa ggtaagcctggtattcctggtcttccgggtgcagacggatctcctggtcttccgggtaat cctggaatacccggagtgaaaggtgaacaaggaccattaggaccgcagggtccagtcggc tttccgggtgtacggggtgtgaaaggcgatgacgggcagcgtggttcgccgggcgaacgc ggtgaaaagggcgagagaggtttggagggagaaaagggtgacattggagcaaaaggtgag cctggagtaccggggccgcaaggaattccaggccttgaaggattggaaggatctaagggc ttcgaagggcctcgtggtgaaactggatctgccggcccgcccggcgaaaaagggaagata ggcatgcctggatttgccggatatcctggaaatcctggagagaaaggagatagagggcaa tcgggagcacaaggctctagcggcgataaaggagaaagaggaagcagcggattgcaggga gaacgtggtgaattaggaccgaggggttttagaggaactcgtggtagaagaggcgcggaa ggattgccaggaccaaagggtgacaccggtcagccaggaccaccaggatcatcaggcgaa atcggctctcctggtgttgaaggtttgcgcggatttataggactgccgggcccaccaggt cttgacgggaaggatggtgtatcaggaccacctggcgagcgcgggccaataggagaaacc ggacccgcagggcttccgggaagtcccggtgttatcggtcctcaaggatcaactggagaa tcgggtccgccaggtgaacctggagcacctggtaatccggggcttcctggagaaactggc ccaccaggtgaacaaggaaaagagggactgccgggtccacccggtttgatgggaccgaaa ggatcaccaggttctattggactgccaggatttccgggcgaaagaggactgagcggtcca ccgggaatacccggctccaaaggagagataggacctgtcggagctcaaggaccgtctggc gataaaggtgctcagggtgatcctggtaaagacgggcaaccaggtttggaaggaaaacaa ggatctaaaggaaaaaagggttccatcggatttaaaggcgaaaaaggtgagtctggactg cctggatctgcaggtcatgacggtctaccaggacaacgcggtttaccgggtccacctgga ccggttggaattccgggcgaagacggcgataaaggaaatatcggcccaccaggagagaaa ggattcaaaggctctcaaggagaaacgggtccggcgggtccacaagggtcacaaggacta cgtggtgagcctggtttaacgggtccttccggcgaaaaaggattatcaggggaaattgga cagcgaggatcaaaaggcgaggacggtttaataggagcaattggaccggctggaccagca ggattgtctggtttaccggggtttccaggagaaaaaggtgaaattggagatcctggagcg gctggacctataggaccaccaggtgttcgaggagaacaaggtcgaacaggaccgagaggt cataaaggtgcgcctggtccaccaggtccggagggtcgccaaggtgaaaaaggagacagt ggaattccaggacatcctggtacaccaggaatagaaggcaaacagggagaaaaaggtcct tcgggagcgaaaggagatgacggcaaggaaggaccatccggaccacccgggccacgagga ctgattggttttgaaggaccgaaaggtgatgttggaatacctggttttcctggtccgccc ggagaacctggtctcataggtgaaaaaggcgaacctggaaaggatggtgaagagggtcga gcaggcgatccaggcataccaggtgaagctgggccacctggcaaggaaggattaccgggt cctcatggaaaatccggtccagaaggcccggcaggtcaacaaggtaacacaggtttgccc ggagaaaaaggagatacgggcccggctggagcaccgggacttcaaggacctatcgggtct caaggtccgcctggaacgcttggtctgccaggagaaagaggcttgccaggagtagctgga gaaagcggtcgtccgggtattccaggtgccgttggtgctcctggaattatcggaccggct ggttcgaagggtccgaaaggtgaccgaggtcgcagaggaaacaaaggacacttgggtgac ctaggacacgtcggtatcaagggtgatcaaggagagaagggaaataaaggcgagagtgga gtgccaggaccggaaggattgaagggaaactctggacctgcaggtccagttggatttaga ggggaacaaggatcgctcggtcctcttggagtgccaggtttgcctggacctaaaggaaac gctggaaatgatggaatgcgtggtaatacaggtccgccaggcccgcctggtccgccgggt ttaccaggaccatctagctcactggagcagctcaatttcggcgacattattccgtcattg ctgcttcgagaaaatgagtcgagtagaagaaaacgcaacgtttcagaaaatatgaatgaa gaagagaaatttgatacgaagtttttagacatatatgcatcgattttcaatatacaacaa gaattggatcaaaggcgtagaccaactggtaccagagactatccggtgagaacatgcaga gatttattttatggacactccaattttgaagatggctggtattggattgatccaaatttg ggcatgcctgatgatgctatctacgtgtattgcaacatttcgaacaagggtgaaacctgc atttttcccgatattcacagtagtcagatgccgaatataccatggaagaaggaaaataat aaaaatgactggtattcacgtttacgaggtggattcaaaataacttacgagacaattgga gcagtgcagatgaattttctgcagctacttagtcaagaagtctatcaaaactttacatac acgtgtatgaacagtgttgcttggtacaatagcaataacccgaataatggctacgatctc tcgctgcgattacttggcgacaatgacgatgagttttcatacaatggttttaaaatgcaa gtccttgtagatggctgtaaaaaccggagtggtaaaaccgagaccgtgtttttagttcat actaagaacccgcaacaattgccgttaatcgatttttatccggttgactacggattacca catcaaacattcggcttcgtggtcggtccggcctgtttcaagtaa

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