Linepithema humile (Argentine ant): 105668729
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Entry
105668729 CDS
T04898
Symbol
Rel
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X2
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04620
Toll-like receptor signaling pathway
lhu04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105668729 (Rel)
04624 Toll and Imd signaling pathway
105668729 (Rel)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105668729 (Rel)
Transcription factors [BR:
lhu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
105668729 (Rel)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
RHD_DNA_bind
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
RRM_9
Motif
Other DBs
NCBI-GeneID:
105668729
NCBI-ProteinID:
XP_012216675
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All DBs
Position
3:complement(20841025..20846511)
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AA seq
891 aa
AA seq
DB search
MPDAFENFNMAIRSVLTPNTIMDDMDLYISFNDLTPVNMDNVDNMDNMDLSPYNSNSSSN
DMVDVSPMSSSIVSPLDYVYSNTVTLLGEPYISVLVQPVEKFRFRYISEMIGTHGTLVGS
GRRRNKSNVPTVQLHDFTENAIIRCTLVTSDEENRLPHAHRLVRRKNNTDSDDPHDIEVS
QENNFIAEFSSMGIIHTARKFVKDEIIRKLRFKALEKRKHVNPNAILSVRDEAQIKFDAE
VYQKSMNLNSVTLCFQGFIKDGNILKPITNPVYSNPINNLKSALTGELKICRIDKYTSSC
EGGEEVFMLVEKVSKKNLRIKFFELNDDNVEIWSDYGRFSELDVHHQFAVVFRTPPYKDL
TITSPKEVFIRLERPSDLDSSDALQFTYKPSDRISRKRTRVSYSNSEELTQVAVNNIPTP
VTNMSTGNESFEMPREIKKILEERCPSAEFQDFVANISVELDLYEKFLQNSEELTVDGAP
TRKDEKSFAKDVVADTMKKVKVEPNKAKDIIMNALKDRTSYGDSPLHCALRHGQKDTAKH
LLMLMSILQSDAKEVVNIQNSSGKTPLHYAATLDEPEIAKALLMLNADTNAVDHYGQMPL
HRAVRFPEAKECVDVLLSDKKINLEANTDSGWAPLLLAAQAGSCYAVRALLKAGADVHNT
EMSHGRTALHLAVEGSHKDIVEYLLKNTKINVNKRNYSGNTALHAAVVTPGAIAKELCDL
LLEYGADPYLRNYNREHNENKIMDETLDIKSEADDNEADKEEYIGQSSFDLASNNPEILQ
FVSNKLLDESIGYKKEEQVANEEKDWLDADQEKQLATILTETNGWKKLAQYLSIDYLLES
VEHPYNATLLLLSYICIQTNFTLDQLRALLYDLALEDAAAYLSQILSLRET
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgttcgagaactttaacatggcgatacggagtgtcctgacgccaaatact
attatggatgacatggacctgtacatctcattcaacgatttaacaccagtgaatatggat
aatgtggataatatggataatatggatctaagcccatacaatagtaactcctcatctaat
gacatggttgatgtatcaccgatgtcatcttccattgtctcgcctttagattatgtttac
agtaatacagtgacattacttggcgaaccatacatcagcgtcttggtgcaaccagtggaa
aaattcagatttcggtacatatctgagatgatcgggacacatgggaccttggttggaagt
ggacgcagacgaaataaatccaacgtacccacagttcaattacatgattttacggagaac
gcgataatacggtgcacattggttacaagcgacgaggaaaaccggttaccgcacgctcat
agattagtgagacgaaaaaacaatacggattcagacgatccgcatgatatagaagtttct
caagagaataattttatagctgaatttagttctatgggcataatacacactgcgagaaaa
tttgtgaaggatgaaataatacgaaaattgcgctttaaagctctggagaagcgcaaacat
gtaaatccaaatgctattctcagtgttcgcgatgaagcacagataaaatttgatgcggaa
gtttatcagaaatctatgaatttaaatagcgttaccctctgttttcaaggattcatcaaa
gacggaaatattctgaagccgatcacaaatccggtttatagtaatccaatcaataatcta
aaaagcgcattaactggagagctcaaaatatgcagaattgataaatatactagcagttgc
gaaggtggggaagaggtgtttatgcttgtagagaaagtgtcgaaaaaaaacctaagaata
aaattttttgaattaaacgatgacaacgttgagatttggtccgattatggccgcttctca
gagctagatgttcatcatcaattcgccgtggtatttcggactccaccgtacaaggattta
actatcacttctccgaaggaagtctttattcgtctggaacgtccatcagatttagattct
tcagacgcactccaatttacttataaacccagcgatcgcataagtaggaagagaacgcga
gtctcttattcgaatagtgaggaactgacacaagtggcagttaacaatatacctacgcca
gtaacaaatatgtctacaggcaatgaaagtttcgaaatgcctagagaaattaaaaagata
ttagaggagagatgcccttctgctgagttccaggatttcgttgcaaacataagtgtagaa
ttagatctttacgagaagtttttacagaatagcgaagaattgactgttgacggagcaccg
actagaaaggatgagaaatcgttcgccaaagatgttgttgctgacacaatgaagaaagtc
aaagtggagccaaataaagcaaaggatattataatgaacgcactcaaagacagaacaagt
tatggtgattcgccattacactgtgcccttcgacacggacaaaaagacactgcaaagcat
cttttaatgttaatgagcattctacaatcagacgctaaagaggtagtgaatattcaaaac
agttcaggcaaaactccgttgcattatgctgctacgttagacgaaccggaaattgcaaaa
gcactgctcatgcttaatgccgatacaaatgcagtggaccattatggacaaatgccacta
cacagagctgtaagatttccggaagcaaaggaatgcgttgatgttttattgagtgacaaa
aagatcaaccttgaagcaaatacagattccgggtgggcgcctttgttattagctgctcaa
gcgggctcatgttacgcagtgcgcgctcttctcaaagcaggtgcagacgtacataatacc
gagatgtctcatggaagaactgctttgcatttggcagtcgaaggtagtcacaaggacata
gttgaatacctgttgaaaaacaccaaaataaatgtaaataaaaggaactatagtggaaac
acggcactacacgccgcagtagttacacccggagcaattgctaaagaattatgtgacctt
ttgttggagtatggagctgatccatacttaaggaattacaatcgcgagcacaacgaaaac
aagattatggacgaaacattagatataaaatctgaagcggacgacaacgaagcggacaag
gaagaatatatcggacagtcatctttcgatttagcttcgaacaatccagaaattttacaa
tttgtctccaataagttgttagatgaatcaattggatacaaaaaggaagagcaagtcgct
aatgaagagaaagattggctggatgcggatcaggagaaacaattagcaactattttaacc
gaaacgaatggatggaaaaaattggcccagtacctcagcatcgattatttattggaatct
gtcgaacacccgtacaatgcaacgttgcttcttttgagttacatttgcatacaaaccaac
ttcaccctcgatcaactgcgagctctactgtatgatttggctttagaagatgctgccgca
tacctgtcacaaattttgtcgctacgggaaacatga
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