Linepithema humile (Argentine ant): 105668774
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Entry
105668774 CDS
T04898
Symbol
sw
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04145
Phagosome
lhu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105668774 (sw)
09142 Cell motility
04814 Motor proteins
105668774 (sw)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105668774 (sw)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lhu04812
]
105668774 (sw)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
105668774 (sw)
Cytoskeleton proteins [BR:
lhu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
105668774 (sw)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Dynein_IC2
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
DapB_C
Motif
Other DBs
NCBI-GeneID:
105668774
NCBI-ProteinID:
XP_012216741
LinkDB
All DBs
Position
3:21498890..21531701
Genome browser
AA seq
723 aa
AA seq
DB search
MMSDRKAELERKKAKLQAIREEKERRRREKEQKDVEEATVRAAGTDKDQRKEIDAMLSSL
GVAPVSDVLSSLSSMSSLTPEQSANATPDASLQPSSINSAQSAGRRKNRELTIVSVAHTN
IPPKEPVVYSKQTQTIQTTHTSHDGLSTSSSAYTIYSSCSTTTPTHSCSAGYFETDWWRP
RKGGSAPNYLSHAFDYYDEYNLNPGLEWEDEFTVLTFDDGQAEDEENSLPHMDGFQSKLP
PGILPHGLPQVKEVQPAVTQVEQEKQKEKPKKEVRELSEEEKQMIILSEDFQRFLDRTSR
IVERALGESVDIYTDYTGTMDGEDGMDEKSHQRLWLNRSFICERWSRNRCVTSMDWSPQF
PELLAASYNNNDDTPNDPDGVCLIWNTKFKKTTPEFIFHCQSPVMSTTFARFHPNLILGG
TYSGQIVLWDNRVQKRTPIQRTPLSATAHTHPVYCLSVVGTQNAHNLISISTDGKLCSWS
LDMLSQPQEALELHTKQSKAIAATCLAFPHGDVNNFVMGSEDGTVYSACRHGSRAGLTET
YEGHQGPVTGISAHAVQGGIDFSHLFLTSSLDWTIKLWSLKENKPLYSFEHNGDYVYDVA
WSPTHPALFASVDDSGRLDLWNLNQDTEVPTASVVVDGCPALNRVSWTPSGLHVTVGDDT
GKIWVYDVAEHLAHPRLDEWNKFLYTQQDLKNNKADEELDKLNLSSGPSSLTSMTSISSV
PLR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatcggaaagctgagttagagaggaagaaggcaaaactgcaggctattagg
gaagaaaaagaaaggcgcagaagggaaaaagaacagaaagatgtagaggaagcaactgtc
cgtgctgccggcacggataaagatcaacgcaaggagatagatgcaatgttgtcctccttg
ggtgtagcaccggtatcagatgtactgtctagtttatctagcatgagttctttaacacct
gaacaaagtgccaatgctacaccagatgccagtttacaaccatctagtataaactctgct
caaagtgcaggacgaaggaagaatcgggagctcacaatcgtttccgtggcgcatacaaac
attcctccgaaggaaccagttgtctacagcaagcaaacgcaaaccattcagacaacgcac
acatcccacgacggactgtccacatcgtcctctgcatacaccatctactcctcctgttca
acaacaacaccaactcactcttgctccgcaggctactttgagactgactggtggcgtccc
aggaaaggtgggtctgcaccaaactacctatctcatgcattcgactattacgacgagtac
aatctaaatcctggtttagaatgggaggacgaatttacagttttgacatttgatgatggc
caagccgaagacgaggaaaacagcttgccgcacatggacggtttccagagtaagcttcca
ccaggaattcttcctcatggattgccgcaggttaaagaagtccagcctgctgttacacag
gtagagcaagagaaacagaaagaaaaaccgaagaaggaagtacgagagcttagcgaagag
gagaagcaaatgattatcttatcggaggactttcaacgatttctcgatcgtactagcagg
attgtggagagagcattgggtgaatctgtcgatatctataccgattacaccggcacaatg
gacggtgaagatggaatggacgagaagagtcaccaacgactctggctaaatcgttcgttc
atctgcgaacgatggtcccgtaatcgttgtgtgacttccatggactggtcgccgcaattc
cccgagcttttagcagcttcgtataataacaatgatgacacaccgaacgatcccgatgga
gtctgtctaatctggaacacgaaattcaagaaaacaaccccggagtttatcttccattgt
cagtcacccgttatgtctaccacgtttgccagattccatccgaatttgatcctgggcggc
acttactccggccagattgtactttgggacaaccgagtacagaagagaactccaattcaa
cgcactccattgtccgctaccgcgcacactcatccggtatactgtttgagcgtcgttgga
acgcaaaacgcgcacaatttgatcagtatttcgaccgatggcaaattgtgctcatggagt
ctagacatgttgtcacaaccacaagaggcattggaattacacacgaagcagtcgaaggcg
attgccgccacgtgcttggcctttccgcacggtgacgttaacaatttcgtaatgggaagc
gaggacgggaccgtttattcagcctgtcgacacggtagccgcgccggattgacggaaacg
tacgaaggtcatcaaggaccagtcactggcattagcgcacacgcggtgcagggtggaata
gatttctcccatctgtttctaacatcctccctcgactggaccatcaaactctggagtttg
aaagaaaacaagccgctatactctttcgaacacaatggtgactatgtctacgacgtcgcc
tggtcaccgacgcatccggcattattcgcttccgttgacgattcgggcagactagatctg
tggaatctgaaccaagatacagaggtacctaccgccagcgtcgtggtcgacgggtgtcca
gctctgaacagagtgtcttggacgccgagcgggttgcatgttaccgtcggtgacgatact
ggtaaaatatgggtctatgatgtcgcagagcatttagctcatccaaggctcgacgaatgg
aacaagttcttgtacacgcaacaggatctgaagaacaacaaggcggatgaagaactggat
aaacttaatcttagttccggcccgtcttctttaacctctatgacatccatttcttcagtt
cctctgagataa
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