KEGG   Linepithema humile (Argentine ant): 105668804
Entry
105668804         CDS       T04898                                 
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03030  DNA replication
lhu03410  Base excision repair
lhu03420  Nucleotide excision repair
lhu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105668804 (RfC4)
   03410 Base excision repair
    105668804 (RfC4)
   03420 Nucleotide excision repair
    105668804 (RfC4)
   03430 Mismatch repair
    105668804 (RfC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lhu03032]
    105668804 (RfC4)
   03036 Chromosome and associated proteins [BR:lhu03036]
    105668804 (RfC4)
   03400 DNA repair and recombination proteins [BR:lhu03400]
    105668804 (RfC4)
DNA replication proteins [BR:lhu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105668804 (RfC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    105668804 (RfC4)
Chromosome and associated proteins [BR:lhu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105668804 (RfC4)
DNA repair and recombination proteins [BR:lhu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105668804 (RfC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    105668804 (RfC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Rad17 AAA_24 Mg_chelatase AAA_11 RuvB_N AAA_assoc_2 nSTAND3 AAA_19 AAA_18 MeaB MipZ ABC_tran AAA_28 NTPase_1 RNA_helicase IstB_IS21 AAA_5 AAA_7 AAA_25 DNAX_ATPase_lid ATPase_2 AAA_3 AAA_23 AAA_30
Other DBs
NCBI-GeneID: 105668804
NCBI-ProteinID: XP_012216837
LinkDB
Position
3:22600392..22602981
AA seq 341 aa
MEIEVLPSTSNGDTKIKEKDSKSSNLPWIEKYRPQVFSDIVGNEDTVSRLAVFAQHGNTP
NIIIAGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERGIDVVRNKIKMFAQKKVNL
PKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEIIEPIQSRCAMLRY
GKLTDAQILAKVLEVCGKENLSYTDDGMEAIVFTAQGDMRQALNNLQSTHNGFNHVNGEN
VFKVCDEPHPLIVKEMLDDCIKGDVSKACTVMDHFWKMGYSAEDIISNIFKVCKNHTMDE
QLKLKFVKEIGLTHMGIVEGINSLLQLHALAARLCRECMSK
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagattgaggttttaccatctacaagcaatggtgacacaaaaattaaagaaaaggat
agtaaatcttcaaatttaccatggatagaaaaatatcggccgcaagtattttctgacatt
gttggcaatgaagacactgtatccagattagctgtttttgctcaacatggaaatactcca
aatattattattgctggtccacctggagtaggcaaaactactaccattttatgtttggca
cgtaccctattaggaccagcatttaaagaagctgtgcttgaactaaatgcttcgaatgag
agaggaatagatgtagttaggaacaaaattaaaatgtttgctcaaaaaaaggttaatcta
ccaaaaggaaaacataagattattattttagacgaggctgacagtatgactgacggtgcg
cagcaggcattacgccgaacaatggagatttacagccatacaaccagatttgctcttgca
tgtaacaacacagaggagatcatcgaacctatacagtcacgatgtgctatgttaagatat
ggaaagttaacagatgcccaaattctagcaaaagtgcttgaagtttgcgggaaagaaaat
ttatcttatacagatgacggtatggaagcaatagtattcacagcccaaggagatatgaga
caagccttgaataatctgcagtctacacataatggtttcaatcatgtgaatggtgaaaat
gtatttaaagtctgcgatgaacctcatcctttaattgttaaagaaatgttggatgattgc
ataaaaggagacgtttctaaagcatgcacggtaatggatcatttctggaaaatgggatac
tctgcggaagatataatcagtaatatatttaaagtttgtaaaaatcacactatggatgaa
cagttaaaactgaaatttgtcaaggaaattgggttaacacatatgggaatagtggaaggt
atcaatagcttgttacagttgcatgccctcgcggcacgactttgccgcgaatgtatgtcg
aaatga

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