Linepithema humile (Argentine ant): 105668804
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Entry
105668804 CDS
T04898
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03030
DNA replication
lhu03410
Base excision repair
lhu03420
Nucleotide excision repair
lhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105668804 (RfC4)
03410 Base excision repair
105668804 (RfC4)
03420 Nucleotide excision repair
105668804 (RfC4)
03430 Mismatch repair
105668804 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhu03032
]
105668804 (RfC4)
03036 Chromosome and associated proteins [BR:
lhu03036
]
105668804 (RfC4)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105668804 (RfC4)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105668804 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
105668804 (RfC4)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105668804 (RfC4)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105668804 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
105668804 (RfC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Rad17
AAA_24
Mg_chelatase
AAA_11
RuvB_N
AAA_assoc_2
nSTAND3
AAA_19
AAA_18
MeaB
MipZ
ABC_tran
AAA_28
NTPase_1
RNA_helicase
IstB_IS21
AAA_5
AAA_7
AAA_25
DNAX_ATPase_lid
ATPase_2
AAA_3
AAA_23
AAA_30
Motif
Other DBs
NCBI-GeneID:
105668804
NCBI-ProteinID:
XP_012216837
LinkDB
All DBs
Position
3:22600392..22602981
Genome browser
AA seq
341 aa
AA seq
DB search
MEIEVLPSTSNGDTKIKEKDSKSSNLPWIEKYRPQVFSDIVGNEDTVSRLAVFAQHGNTP
NIIIAGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERGIDVVRNKIKMFAQKKVNL
PKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEIIEPIQSRCAMLRY
GKLTDAQILAKVLEVCGKENLSYTDDGMEAIVFTAQGDMRQALNNLQSTHNGFNHVNGEN
VFKVCDEPHPLIVKEMLDDCIKGDVSKACTVMDHFWKMGYSAEDIISNIFKVCKNHTMDE
QLKLKFVKEIGLTHMGIVEGINSLLQLHALAARLCRECMSK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaggttttaccatctacaagcaatggtgacacaaaaattaaagaaaaggat
agtaaatcttcaaatttaccatggatagaaaaatatcggccgcaagtattttctgacatt
gttggcaatgaagacactgtatccagattagctgtttttgctcaacatggaaatactcca
aatattattattgctggtccacctggagtaggcaaaactactaccattttatgtttggca
cgtaccctattaggaccagcatttaaagaagctgtgcttgaactaaatgcttcgaatgag
agaggaatagatgtagttaggaacaaaattaaaatgtttgctcaaaaaaaggttaatcta
ccaaaaggaaaacataagattattattttagacgaggctgacagtatgactgacggtgcg
cagcaggcattacgccgaacaatggagatttacagccatacaaccagatttgctcttgca
tgtaacaacacagaggagatcatcgaacctatacagtcacgatgtgctatgttaagatat
ggaaagttaacagatgcccaaattctagcaaaagtgcttgaagtttgcgggaaagaaaat
ttatcttatacagatgacggtatggaagcaatagtattcacagcccaaggagatatgaga
caagccttgaataatctgcagtctacacataatggtttcaatcatgtgaatggtgaaaat
gtatttaaagtctgcgatgaacctcatcctttaattgttaaagaaatgttggatgattgc
ataaaaggagacgtttctaaagcatgcacggtaatggatcatttctggaaaatgggatac
tctgcggaagatataatcagtaatatatttaaagtttgtaaaaatcacactatggatgaa
cagttaaaactgaaatttgtcaaggaaattgggttaacacatatgggaatagtggaaggt
atcaatagcttgttacagttgcatgccctcgcggcacgactttgccgcgaatgtatgtcg
aaatga
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