Linepithema humile (Argentine ant): 105668959
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Entry
105668959 CDS
T04898
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03008
Ribosome biogenesis in eukaryotes
lhu03013
Nucleocytoplasmic transport
lhu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105668959
03015 mRNA surveillance pathway
105668959
03008 Ribosome biogenesis in eukaryotes
105668959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105668959
03009 Ribosome biogenesis [BR:
lhu03009
]
105668959
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105668959
mRNA cycle factors
Stress granule specific factors
105668959
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105668959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
NTF2
Tap-RNA_bind
UBA_4
Tudor_5
UBA_8
Motif
Other DBs
NCBI-GeneID:
105668959
NCBI-ProteinID:
XP_012217105
LinkDB
All DBs
Position
1:13154623..13156893
Genome browser
AA seq
529 aa
AA seq
DB search
MNKLIHPAVAQQPVPLVPIQLDSAIAIRIAMGAKMANERLLMAHPDIWHQIRIIRGAQYD
KETILKAILKAIEPFDLIPVKYDVCGDDAYFMARNCGFALEKLCKTNLIINNVQNDAVIL
MIILGYSSIQNTKIHIQPVLLAALAKRYDPNQKILNLRSFHKDPNIESIVYCPLSLDKMS
NHVLKLAKNAIATIEYLNLQYNELFNITAIENSELTFIKYLDLRNNNLLNMNVLAPLQDL
KIIKLWLDGNPLCENYATAKRYVENAKKYCPYLQELDGVTIVSNMPFIYRDYFKDEKALD
FVRKFASHFFTLYDQLDRTVLRGIYHKNAFYSMSFGIPNSMAQKKNLVQYTGSRNLLRKG
PKKNSHLYYGQEDILANLIKMPRTYHDKNSFKYDIMYDDGKCIVINITGLFKKLSSGTNI
LSFSRTFVLLAAMDNEYHILNDQNHIDAAPQNMTPDQIAVKYTYDEFVPTCFSLSEKSVL
ITRMKQITKMNDEWCKNYLSENEWDTRKAVNSFMKDLKNSSIPDLAFHN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactgatacatccagcagttgctcagcaacctgtacctctcgttcctattcag
ttggattctgcaattgccataaggatagctatgggtgcaaaaatggccaatgaaagatta
ttaatggcacaccctgatatatggcatcaaattagaatcatcagaggtgcccaatacgac
aaggaaacaattctaaaggctattttgaaggcgatagaaccatttgatttaataccagtg
aagtatgatgtctgcggagatgatgcatatttcatggcgagaaattgtggctttgctctt
gagaagctgtgcaagacaaacttgatcatcaataatgttcagaacgatgctgtcatcctt
atgataattttaggatactcctcaatccaaaatacaaaaattcacatacagccagttctt
ttagctgcactagcaaagaggtatgatccgaatcagaagatattaaatttaagaagtttc
cacaaagatccgaatatagaaagtatcgtctactgtcctttgtcactagataaaatgtcc
aatcatgttttaaaactagccaaaaatgctatagccacgatcgagtacttgaatttacaa
tataacgaattgttcaacataacagcgatcgagaattcagaactaacattcatcaaatac
ttggatctaagaaacaacaatttgttaaatatgaacgtattggcgcctctgcaagatcta
aaaatcattaaactctggttggatggaaatccgctttgcgaaaattacgcgactgcaaaa
cgatacgtggaaaatgcaaagaagtattgtccgtatctgcaggagctagatggtgtaacc
atcgtgtctaacatgccgtttatatacagagactactttaaagacgaaaaagcactggat
tttgtgcgtaaatttgcttcacactttttcactttgtacgatcaactcgacaggacggta
ttacggggaatttatcacaagaacgcgttttactcaatgagcttcggcattccgaattcc
atggcgcaaaagaagaaccttgttcaatatacaggaagtagaaatttactgagaaaaggg
ccaaagaagaattcgcatctctattacggtcaagaggatattctggcaaatctaatcaaa
atgcctagaacttatcatgacaaaaactcttttaaatatgacattatgtacgacgatggc
aagtgcatagtaataaacattacaggattattcaaaaaattaagctccggcacaaacata
ttgtcgttttcgagaacgtttgttctattggctgcgatggacaacgaatatcacattttg
aacgatcagaatcacatagacgcagcccctcagaatatgacgcctgatcaaatagctgtc
aagtacacgtatgacgaatttgtaccgacttgcttcagtctgagcgagaaatcggtacta
attaccagaatgaaacagatcactaagatgaatgacgaatggtgcaaaaattatctgtcg
gaaaacgagtgggacacgcggaaggcagtaaatagcttcatgaaggatctcaaaaattca
tcgatacctgatctcgcgttccacaattag
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