Linepithema humile (Argentine ant): 105669094
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Entry
105669094 CDS
T04898
Symbol
Trpgamma
Name
(RefSeq) transient receptor potential-gamma protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
105669094 (Trpgamma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lhu04040
]
105669094 (Trpgamma)
Ion channels [BR:
lhu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105669094 (Trpgamma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Holin_BhlA
Terminase-T7_RNaseH-like
Motif
Other DBs
NCBI-GeneID:
105669094
NCBI-ProteinID:
XP_012217270
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All DBs
Position
1:complement(44966052..45068690)
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AA seq
1329 aa
AA seq
DB search
MNVRARRRAREESQEAGGRGGESLSISPKPGKVWPRKRLLSRGPSRHFALVCAEGDLPRI
FLTFSAEGDHDRNIPEIESAYEDEEQFARGGRTPGEGVSKEDGPGGGGTNDFPLRMAADT
TRGRITAVAGGFLRGAGQHVNFDPEAPPPPLHVAQQQTTSLLERPEIDKKVKRHSIHGMM
EEENVVRPHQEMASLSLQEKKYLLAVERGDVASVRRMLQKAHEADININCVDPLGRSALL
MAIDNENLEMVELLIEHKVDTKDALLHAISEEFVEAVEVLLEHEETLHRNGEPHSWEALP
PDTATFTPDITPLILSAHRDNYEIIKILLDRGSTLPMPHDVRCGCDECVTSRMEDSLRHS
RSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKCEYQELRRQCQDFAT
ALLDHTRSSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFVAHPNVQQLLASI
WYEGLPGFRRKNMFLQALEIVRIGVLFPFFSVAYIIAPHSIVGQTMRKPFIKFICHSASY
FTFLFMLILASQRIETVIGNWLGHETPEQEPVPTKRGAAPTIVEWFILAWVSGLIWSEVK
QLWDVGLEEYVNDMWNVIDFVTNSLYVATVALRVVAYYRVQKENADLKLAGAEPIELERE
EWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNPYLGPLQVSLSRMVIDIMKFFFLYVLV
LFAFSCGLNQLLWYYADLEKKRCPTAWTYSSNGSINSTANADSNACVVWRRFANLFETIQ
TLFWAVFGLIDLESFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISE
RADVEWKFARSKLWISYFEEGGTAPPPFNIIPTPKSVWYVGQWIYRKLCGHSRAAKKEHM
RTIRRKVKQASERDFRYQSIMRNLVRRYVTVEQRKAENEGVTEDDVNEIKQDISAFRCEL
IEILKNSGMNTSTAASSGTDASLKELSIGAGGKKNRQKERRLMKGFNIAPQPGGSGTLPP
VAEFIASLQQAQHENSHNDLFGSTLSGIFGPGGATPKKSPHHTSTNSVPGLATGPRQSRG
TRGSSRKKRWGTLIEAAKAGRVSRLIGRSRSEDSVYSPASEDGGSRSEGSSDSKSSLEGA
SHDVQSRTQHPPPHAHSHHAHHHETHHVFSHGLGPALAALRKKRKKFSASRSSTPAMTGS
TNTNPPESSAVQSVTTLLASRVYSKKQLQRASSVPTRGPELTPQSSIMSRRHEVTQSQQP
SLDVVEIASISEQRGVVSAVPLTPSTTEESVVASGSTSITVKRNGSATQLQHLPGIEPIS
GHDVSTGWL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcgagcgcgaagacgagcgcgagaagaatcacaggaagccggcgggaggggc
ggagagagtttatcgatttcccccaagcctgggaaggtctggcctaggaagaggcttctc
tcgagaggtccctctcgccatttcgctctcgtgtgcgcggaaggagacttaccgagaatt
tttctcacgttttcagccgagggcgatcatgacaggaacataccggagatcgaaagcgcg
tacgaagatgaggagcagttcgccaggggcggcagaacccctggtgaaggcgttagtaaa
gaagacggtccaggcggaggtggtacaaacgactttcccttgagaatggcggccgacaca
acgaggggtcgaatcactgccgtcgccggcggcttcctgcgaggcgccgggcagcatgtg
aacttcgaccccgaggcgcctccaccgccgctgcatgtcgcacaacagcagacgactagt
ttactcgaacgaccggaaatcgacaagaaagttaagaggcacagcatacacggcatgatg
gaggaggagaacgtggtgaggcctcatcaggaaatggccagcctgtcgctccaggagaag
aaatatcttctcgccgttgagcgcggagacgtggcttccgtcagaagaatgctccaaaaa
gcccacgaggccgacattaacatcaactgcgtggatcctctcggacgatcggcgctgctc
atggcgatcgataatgaaaatctggagatggtggagcttttaatagagcacaaggtcgat
accaaggatgcactccttcacgccatctccgaggaatttgtcgaggcggtggaggtcctt
ttggagcatgaggagacactccatagaaatggcgagccacatagctgggaggctctaccc
cctgatacagccacgttcacgcccgacatcacgccgttgatcttgtcggcccatagagac
aactatgaaatcataaagatccttttggatcgcggatccaccctaccgatgccgcacgac
gtacgttgcggatgcgacgagtgcgtgacatcgaggatggaggattccctgaggcattcg
aggagccgaataaacgcctatcgggctctggcgtcgccgtccttgatagcactgtcgtct
aaggatcccatactgactgccttcgagctctcctgggaacttcgacgactttcgttctta
gagcacgagttcaagtgcgagtatcaagagctccgaagacagtgccaagatttcgccacc
gctttgctggaccacaccagaagttcctacgagcttgaggtcctgctgaatcacgatcca
acgggaccagccttcgagcacggggagaggatgcatctcaaccgcttgaaattagcgatt
aaactgcggcaaaagaagttcgtggcgcatcctaacgtgcagcagctactagcatcgatc
tggtacgagggcctgccggggtttcggcggaagaacatgttccttcaggcgctggagatc
gtcaggatcggcgtactcttcccgtttttcagcgtggcgtacatcattgcgccccacagc
atagtcggccaaaccatgagaaagccattcatcaaattcatctgtcactccgcgtcgtat
ttcacttttctattcatgttaattctggctagtcagcgaatagaaactgtgattggcaat
tggttgggacacgagacccccgaacaggaaccagtgccgacgaaaagaggcgccgcacct
acgatcgtcgaatggtttatattagcctgggtgtcggggctgatctggtcggaggtgaaa
cagttgtgggacgtgggcctggaggaatacgtgaacgacatgtggaacgtgatcgacttc
gtgacgaactcgctgtacgtagccacggtcgcgctgagggtcgtcgcttactacagggtg
caaaaggagaacgcggacctgaagttggcgggcgcggagccgatcgagcttgagcgcgag
gagtgggacacttgggatccgatgctcatctccgagggtctcttttccgccgccaacatc
ttcagctcgctgaagctcgtctacatattctccgtgaatccttacctcggcccgctgcaa
gtttccctgtcgagaatggtcatagacattatgaagttcttcttcctctacgtgctggtg
ctcttcgccttctcgtgcggtctcaatcaacttctctggtattacgccgacttggagaag
aagcgatgccccacggcgtggacgtattcgtctaacggcagcatcaactccaccgccaac
gcagactccaacgcgtgcgtcgtctggcgtcgattcgcaaatttgttcgaaacgatacag
acgctcttctgggcggtgttcggcctgattgacctcgagagcttcgagctggacggcatc
aagatatttaccaggttctggggtatgctgatgttcggcacttactcggtcatcaacatt
gtcgtcctcttgaaccttctgatcgccatgatgaatcattcctatcaactaatctcggaa
cgcgccgatgtcgagtggaagttcgccaggagcaaactttggatcagttatttcgaggaa
ggcggaactgctccgccgccgtttaacatcataccgacaccgaagagcgtctggtatgtc
ggacaatggatatatcggaagctctgtggacacagcagggcggccaaaaaggagcacatg
cgcacgatcaggcgtaaggtcaaacaggcttccgagcgagacttcagatatcagagtatc
atgaggaatttggtaagacgatacgtcaccgtcgagcaacgcaaggcggaaaacgaaggt
gtcacggaggacgacgtgaacgaaatcaaacaagacatcagtgcatttcgctgcgagctt
atcgagatactgaagaattccggcatgaacacgtcgaccgcggcgagcagcggtacggac
gctagccttaaagagctgtccataggtgcgggtggcaagaaaaaccgccagaaggagcga
cgtttgatgaagggtttcaacatcgcgccgcaaccgggcggaagcggcaccttaccgccc
gtggcggaatttatcgcgtcccttcagcaagcgcagcacgaaaattcccataatgatcta
tttggctcgactcttagcggcatattcgggccgggcggcgcaaccccgaaaaagagccca
catcacaccagcactaatagcgtgcccggtctggccaccgggccgcgacaaagtcgcggc
accagaggtagctcccggaagaaacgttggggcactctgatcgaggcggcgaaggccgga
agagtctccagattgatcggtagatctcgttcggaggactcggtgtactcgccggcgtcc
gaggacggcggatcgcggtccgagggttcctcggactcgaaatcctccttggagggagcc
agtcacgatgtacaaagcagaacccagcaccctccccctcacgctcactctcatcacgcg
catcatcacgagacgcatcacgtgtttagccacggtctgggcccggctctggccgcctta
agaaagaagcgcaagaagttctccgcctcgcggtcctccacacccgcgatgaccggcagc
acgaacacgaatcccccggaatcgagcgcggtgcagtcggtcaccaccctcctggcgtcc
agagtctactcgaagaagcagctgcagcgcgcgagcagcgtgccaacccggggtcccgaa
ttaacgccgcagtcatcgataatgtcacgacgacacgaggtcacgcagagccagcagccc
agtctcgatgttgttgagatcgccagcatcagcgagcagcgaggtgtcgtcagtgcggtt
ccactgacgccgtcgaccaccgaggagagcgtggtggcgagcggctcgacgtcgatcacg
gtgaagcgaaacggatcggcgacgcagctgcaacaccttcctggcatcgagccgatttcc
ggccacgacgtgtccaccggctggctctga
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