Linepithema humile (Argentine ant): 105669404
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Entry
105669404 CDS
T04898
Symbol
plx
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105669404 (plx)
Membrane trafficking [BR:
lhu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105669404 (plx)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105669404 (plx)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
105669404 (plx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
TBC1D_hel
PID
Wtap
Sec3_CC
DUF2533
Motif
Other DBs
NCBI-GeneID:
105669404
NCBI-ProteinID:
XP_012217771
LinkDB
All DBs
Position
5:17132459..17152932
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AA seq
1292 aa
AA seq
DB search
MITVPISASSPYVKTTSYSDASIVAKKPSVQQFLQDMKEHSAAQRMERDKEVPQRSQSSA
ASLTSIGADISPSSSHFFEVFYVGKIKVSNPKVQESFIDDALIRFRVHVLEKSRSSTSNL
LTECRLQRQAVTSSINRRNSTESTASESGSIENVSGNSTIPNVNPLGVPPVLSGSVETFP
RTSANSADNDSRNGNRTSESSTNSNITVPEVMRNRAASTGSVLGGRRDSGAKGNEDHNRT
MVFEVGRNDLRLISPDRKRIVLHKHLKDVASCAQGIKNPDHFGFICKEPEPCFIGYVFKC
QSGSVADDLVAAISQAFVATCNIAKKEKYSVYSCEHCPMYWYNKLYQEIEGQNDSRVQSI
IFSRMELLPEDEQEIVVRKYKGAEAAGNIGAGSMSLREQNQFLMQLLRAHCESKQTRHVH
DTAENRSEFLNQYLNVGVGSTIFMKAKRSLTNSFDNLMKRKGSRDDFGLGPQLRDSNHLS
MGIQKNGSQSPDNSRQSSIMDTSPDSSRPRSLRVSPEQQIVVNNAPKSPMMDIFLKVGNS
SKISPTEPTGSNTTIQANSSWRQTILNRVVTPSKDHNVKETEKVGNISVIKNLETPVKRR
TKQELRDLWKKAINQQLILIRMEKENAKLRECQEEASKKEAVKRIKLEYDELSSCAREVV
EVWDLLISKESRVSTKCDNQMLLHAIKQGVPKGKRGEVWQFLAEQFCLKQPPIDTQDFPN
YNTPYELLLKQLTSQQHAILIDLGRTFPSHPYFSSHLGPGQLALFNLLKAYSLLDYEVGY
CQGLSFVAGVLLLHMAEDQAFFLLRHLMFRRGLRKLYLPDMAELQLHLYQLSRLLHDRLP
AIYNHFDKHEVSPTLYAAPWLLTLFASQFPLGFVTRVFDLLFLESSEVLFRVSVALLEEH
QDQLLGCDSFEEIMGYLKTRVPAVNKQSLDRIMKRVFYPDLEISKQLNEYRVEYQVLQEE
MISVKPQIENLEKFKLMNKQLTQEVAQLNEQLEITVSNLHRLETTRSVQQANIHKLETQN
RSLEVTVATLGTFIQQLVDTRADIEVPGDVRRIIAQLSMVEKRRNAGTRSYPLKVIEDKH
GMIKSNSTGRDSHNLLRNNSLETPYPLKSTLSQPNLATKVSSFFSNSHNQILKQRAELEA
LRNKYSEQAVKNNNDENDPKTVNIDIQITDTMNLANNPPPQSENNLKVPVTNLEKSISLP
LRGKLKSSKSAYELGSVKKVPTSKLEVTNNDSLTNLTGTMHPLDTCSDVNFRYGGTTKLK
SIKPVRLFNPSCQEDSSNNKQKSDQNSDPLNR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgataaccgtgccgatatcagcctcgagtccctacgtgaagactacgtcctacagtgat
gcgagcatagttgctaaaaagccttcggttcaacagtttttgcaagacatgaaggaacat
tcggcagctcaacgaatggagcgagataaggaggtgccacagcggtcgcaaagcagcgcg
gctagcttgacgtctataggtgccgatatatctccaagttcttcccatttcttcgaggta
ttctacgttggtaaaattaaagtatcgaatccgaaagtacaggaatcattcatcgatgac
gccttgatacggtttcgcgttcatgtactcgaaaaatcgagatcttctacgagtaatcta
ctgacagaatgtcgattgcaacgccaagctgtaacgtcttccattaatagaagaaatagt
acggaatctaccgctagtgaatcgggcagtattgagaacgtgtcgggaaacagtacaatt
ccgaacgtgaatccgcttggagttccgccagttttaagcggctccgtggaaacttttcca
agaaccagcgcgaactcagcagacaacgatagccgtaatggaaatcgaacgtccgaatct
tccactaattctaatatcaccgtacctgaagttatgcgaaatcgcgcggcgtctaccggc
agtgttttaggcggtaggagggattctggtgctaaaggaaatgaggatcataatcgcact
atggtctttgaagtaggacgaaatgatttgaggttgattagtccggacaggaagcgcatc
gttttgcataaacatctgaaagatgtagccagctgcgcgcaaggtataaaaaatcctgat
cactttggatttatttgcaaagaacctgaaccttgctttatcgggtacgtcttcaaatgc
caatccggatcagtcgcagatgatcttgttgcagcaattagtcaagcctttgttgcgact
tgtaatatcgcgaagaaggaaaaatattctgtatactcttgcgagcattgtcctatgtac
tggtataataaattatatcaagagattgaagggcaaaatgattcaagagtgcaaagtatt
attttttcacgtatggaactgttgccggaggatgaacaggagatcgttgttaggaaatat
aagggcgctgaggctgcaggcaatatcggtgcaggctctatgagtcttcgagagcaaaat
caattcctaatgcaactgttgcgtgctcattgtgaatcaaaacaaactagacatgtacac
gatacggctgagaataggagtgaatttcttaatcaatatctaaacgtcggcgttggcagt
acgatatttatgaaggcaaaacgctctctcacgaatagctttgacaaccttatgaagagg
aaaggttcgcgtgacgattttggcttgggcccacaattgagggattcgaatcatttaagt
atggggatacaaaagaatggtagccagagtccggacaattcgcgacaatcatctataatg
gacacttcgccggattcgagtaggccaagatcgttgcgtgtgtcgcctgaacaacaaatc
gttgtaaacaacgcaccaaagagtcccatgatggacatatttttaaaagttggcaactca
tcgaaaatatctccgacggagcccaccggaagcaatacaacaatacaagccaacagttcg
tggcggcaaacgatactaaacagagtcgtgacaccgagtaaagatcacaatgtcaaggaa
actgaaaaagtcgggaatattagtgtcattaaaaatttagagactcccgttaaacgcaga
acaaaacaagaattgcgagatctgtggaaaaaagcgatcaatcaacagttgatacttata
agaatggaaaaagagaatgcaaagctcagagaatgtcaagaggaggcgagtaagaaggag
gcagtaaagagaatcaaattagaatacgatgagcttagcagctgtgcgcgtgaggtggta
gaagtttgggatcttctcattagcaaggaatcgcgagtttccaccaaatgcgacaatcag
atgcttttgcatgccattaaacaaggtgtaccgaaaggaaagagaggcgaggtctggcaa
tttctagccgaacaattctgcttaaagcaaccacctatagacactcaagatttcccgaat
tacaatacgccctacgaactacttctgaagcagctcacatcccaacagcatgctattctt
atcgatctgggaagaacgttcccgagtcatccatattttagttcacacttgggacctggt
caattagcgctcttcaatttattgaaggcctactccttattagattacgaagtcggttat
tgtcaaggtctcagttttgtcgccggcgtgcttctattgcatatggctgaagatcaggcc
tttttcttattacgacatctgatgtttcgccgaggcctcagaaaattgtatttgccagat
atggcagaattgcaattacacttgtatcaactctccaggctgttacacgaccgcttacca
gctatttataatcacttcgacaaacatgaagtttcaccaactttatacgccgctccgtgg
ttattaactctgtttgccagtcaatttcctttgggctttgtaactagagtttttgatttg
ctctttttggaaagctctgaagttctcttccgtgtatcggttgcgctattagaagagcat
caggatcaactattgggttgtgacagctttgaagaaattatgggatatctcaagacacgt
gttccagcagtgaacaaacaaagtttagatcgcattatgaaacgtgtattttaccccgat
ttggagatttccaaacaattaaacgaatacagagtggaataccaagtgcttcaagaggaa
atgatttcagtaaagccacaaatagagaatttggaaaagtttaaattaatgaacaagcaa
ctcacacaagaagttgcacaactcaacgagcaacttgagattactgtgagcaacttacac
aggctcgaaacgacgcgttcagtgcagcaagcgaatatccataaactcgagactcagaat
cgcagtcttgaagtaacggttgccacattaggcacattcattcaacaattagtagacaca
cgtgctgacatcgaagtgccgggcgacgttcgtaggataatcgcacagttaagcatggtt
gagaaacgacgaaatgctggcaccaggtcatatcctttaaaggttatcgaggacaaacac
ggcatgataaagagcaactcgactggcagagattctcacaatcttcttaggaataacagt
ctggagacaccgtatccgttgaaatcgactttaagtcaacccaatttagcaacaaaagtc
tcttcgtttttctcgaattcgcacaatcagatattgaagcaacgcgcggagttggaagct
ctcagaaacaaatattccgagcaagcggtgaaaaataacaacgatgagaatgatcccaaa
acggttaacattgacattcagatcacggataccatgaatctggctaacaatccaccccct
caaagcgagaacaatttgaaggttccagtcactaatttggagaaatcgatatcgttaccg
ttaaggggtaaattgaaatcgtcgaagtcggcgtacgaattaggatccgtgaaaaaagtt
cccaccagcaagctcgaagttacgaacaacgattcgttgacgaatttgactggaaccatg
cacccacttgacacttgcagtgacgtgaatttccggtatggcggaaccacgaaactcaag
tctattaaacctgtcagattatttaatccgagttgtcaggaagatagcagtaataacaaa
cagaagtccgaccaaaattcagatcctttaaatagataa
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