Linepithema humile (Argentine ant): 105669423
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Entry
105669423 CDS
T04898
Symbol
RfC38
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03030
DNA replication
lhu03410
Base excision repair
lhu03420
Nucleotide excision repair
lhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105669423 (RfC38)
03410 Base excision repair
105669423 (RfC38)
03420 Nucleotide excision repair
105669423 (RfC38)
03430 Mismatch repair
105669423 (RfC38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhu03032
]
105669423 (RfC38)
03036 Chromosome and associated proteins [BR:
lhu03036
]
105669423 (RfC38)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105669423 (RfC38)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105669423 (RfC38)
DNA Replication Termination Factors
ELG1-RFC complex
105669423 (RfC38)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105669423 (RfC38)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105669423 (RfC38)
Check point factors
HRAD17(Rad24)-RFC complex
105669423 (RfC38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_lid_RFC1
DNA_pol3_delta2
Rad17
AAA_11
AAA
AAA_22
Rep_fac_C
AAA_16
Mg_chelatase
AAA_30
RuvB_N
Motif
Other DBs
NCBI-GeneID:
105669423
NCBI-ProteinID:
XP_012217808
LinkDB
All DBs
Position
6:14213714..14217752
Genome browser
AA seq
354 aa
AA seq
DB search
MSLWVDKYRPTTLAKLDYHLEQAEDLRNMVQKRDFPHLLVHGPPGAGKKTRILCILKELY
GSAAERVKVETVQFETASKKKLEILTMSSNYHTEVNPSDAGLHDRIVIMELIKATAQTHH
IDIGQKEFKVVLLSNVDQLTRDAQHALRRTMEKYISTCRLILCANSTSRVLPAIQSRCVR
IRVPAPTVFEIKTILHLICKREGLNIPDELINRVIEASNRNLRRAILMLEACKVEQYPFT
TDQKVTEPDWQIYIRNTASMMVSEQSPKILLDIRNRFYDLLTRAVPCDLIFRGLLQECIK
KCDDQLKKEIIGTASEYQHRMIRGSKPIFHLEAFAARFMAVYKKYIESSLESFM
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggttgataaatatcgtccaacaacacttgcgaagttagattatcatctc
gaacaagcagaggacttgagaaacatggtacaaaaacgagactttcctcatttattagtg
cacggaccacctggtgcaggaaagaaaacacgaatattgtgtattttgaaagaactttat
ggaagtgcagctgaaagagtaaaagtagaaactgtgcagtttgagacagcatctaaaaag
aaattagaaatattaacaatgagcagtaattaccacacagaagtaaatcccagtgacgca
ggattacatgacagaattgttattatggaattgataaaagcaactgcacaaacacatcac
atagatataggtcaaaaggagtttaaagtggtattgttgtctaatgtggatcaacttaca
agagacgcacagcatgcacttcgtagaacaatggaaaaatatattagtacgtgcagattg
attctttgtgcaaattcaacatcacgagtattgccagcaattcaatcacgatgtgtgcga
atcagagttcctgcgccaacagtctttgaaatcaaaactattttacatttaatttgtaaa
cgtgaaggattaaacatacctgatgaattaattaatcgagtaattgaagctagtaataga
aatcttagacgggcaatattaatgctcgaggcttgcaaagtcgaacaatatccatttact
accgatcaaaaagtaacagagccggattggcaaatatatatacgaaatacagctagtatg
atggtttctgaacaatctcctaaaatacttttagacatacggaatagattttatgatctg
ttaacgcgtgctgtaccatgcgatctaatatttagaggattgctacaagaatgcataaaa
aaatgtgatgatcaattaaaaaaagaaattatcggcactgcgtcagagtatcaacataga
atgatacgtggctcgaaacctatttttcatttagaggcttttgctgcacgatttatggct
gtttacaaaaaatatattgaatcatctttagaaagttttatgtaa
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