Linepithema humile (Argentine ant): 105669693
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Entry
105669693 CDS
T04898
Symbol
cyc
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
105669693 (cyc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105669693 (cyc)
Transcription factors [BR:
lhu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105669693 (cyc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_8
bHLH_NCOA
bHLH_HIF1A
PAS_2
bHLH_NPAS4
RESC7
Motif
Other DBs
NCBI-GeneID:
105669693
NCBI-ProteinID:
XP_012218209
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All DBs
Position
1:21316470..21337065
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AA seq
933 aa
AA seq
DB search
MYALLDEGGPLPDRSRGGVVENDDALVAAGDGACVNDRILHYHQRHPHHHQRHCELQQQQ
QSAEPELDDLLRFRGSGSTTTGQRRGEMVAQEMAQGYTQLLHPATAQEPQEFISLEELQP
RIHHQEHHGTVHDTCVQIASSVSQLHRQHHQQQRQTDQQQQQQQQRDYYNLLSVQESSCS
TVYFGEIGTGSGVGELTAASAGGGGEGLAPTPTPASSSNSSGSSVSTTTTPSSPSATTTT
TTTTSTTAAFNSGTATIPQVATGAEPPQHMETPPTMVPDQQAPASGHHYHHRHHHHHHHN
HHHHHHRHHRNTSSTASHGPATDTSDEFAPVSRKRKLSCNVGSNLLDDLKDDAKSVRTND
DSKKQNHSEIEKRRRDKMNTYITELSAMVPMCYAMSRKLDKLTVLRMAVQHLKTILGAVT
SYTEGHYKPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQGDLLGQ
SWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARRSFFCR
MKRKVDGVRCEEIEVKEETDTTSGCHKRKKRQNVDWKYCVIQCTGYLKSWAPAKIGLEEQ
EGEADGDACNLSCLVAVGRVQTVISTAALPSKKPHLRPIQFVSRHAMDGKFLFVDQRATP
VLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQTSERVTTQIYRFRSKGANFMRLQSE
WKSFRNPWTKDIEYLIAKNSAIFCDARPGGNNGSEDSSVQGNYDYFAQSNGALEKLISSH
VEVSKIGRQIAEEVLDLQRRGEDSSSGSSPGPGTEPGLLNIESQITTTASPEGLPDVIQP
GGIGSDNSSSDPTSTFNHVVNNVQLNSIANDQGASPDGDMMDMIGGTAINESSNPIPSDG
NDEAAMAVIMSLLEADAGLGGPVDFSGLPWPLP
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgcttcttgacgagggtggtccactgccggaccgcagtcgcggtggcgtcgtc
gagaacgacgacgcgttggtcgccgcaggcgatggcgcctgtgtgaacgaccgcatcctc
cattatcatcagcggcatcctcatcatcatcagcgtcattgcgagctgcagcagcagcag
cagtcggcggaaccggaactggacgatctgctgcgatttcgcggatccggaagcacgacg
acggggcagcgacggggggagatggtggcgcaggaaatggcacagggctacacgcagctc
ctgcatccggcgacggcccaggaaccgcaggaattcatctcgctggaggagctgcagccg
cgcatccaccatcaggagcaccatggcaccgtgcacgacacctgcgtgcaaatcgcctcc
tcggtctcgcagctccaccgtcagcatcatcagcaacagcggcagaccgatcaacagcag
cagcagcagcagcagcgggattattataacctcttgtccgtgcaggaaagttcgtgctcc
acggtttatttcggcgagataggcacgggttccggggtgggagagctaaccgccgcctcg
gcggggggtggtggcgaaggtctcgccccgactccaacccccgccagcagcagcaacagc
agcggcagcagtgtcagtaccaccaccacccccagcagcccgagcgcgaccactacaact
accaccaccacctccaccaccgccgccttcaacagcggcaccgccaccatcccacaggtt
gcaacgggggctgaaccgccccagcacatggagacacccccgacgatggtccccgaccag
caggcgcccgcctccggccatcactatcaccatcgccatcatcatcatcatcatcacaac
catcaccatcatcatcatcgacaccatcgtaacacgtccagcacggctagccatggaccg
gcgaccgacacctcggacgagttcgcaccggtctccaggaaacggaagctttcctgcaat
gttggaagcaatctcttggatgacctgaaagacgacgccaaatccgttcgcacaaacgac
gacagtaagaaacagaaccacagtgaaatagagaagcgcaggagggacaagatgaatacg
tacatcaccgagctctcggcaatggtgccaatgtgttacgcgatgtcgcggaagctagac
aagttgacggtgctgcgaatggcagtgcagcatctcaagactatcctcggcgcggttacc
tcatacacggaaggtcactacaagcctgcgtttctcagcgatcaggaactcaagacgctg
atacttcaagccgcggagggcttcgtcttcgtagtgggctgcgatcgtggaagaattctc
tacgtgtccgagtccgtcttgcagactctcaattattctcagggtgacctgttgggtcaa
agttggttcgatattttgcatccgaaggatgtcgccaaggtgaaggagcagctctcatcc
tccgatctcagcccgagagagcgactgatcgacgcgaaaaccatgttaccggtgaaaact
gacgtgccgcaaggtgtgtcgcggctttgccccggcgcccggcgatctttcttctgtcgg
atgaagcgtaaggtcgacggggtgcgttgcgaggagatagaagtgaaggaggaaactgac
accacgagcggctgccacaagcgaaagaaacggcaaaacgtcgattggaagtattgcgtg
attcaatgcacgggttacttgaagtcctgggcgcccgcgaagatcggcctcgaggagcag
gagggcgaggccgacggcgacgcctgcaatctgtcctgcctggtcgcagtcggccgggtt
caaacggtgatatcaacggccgcgctgccgtcgaagaagccccacttgaggcccatacag
ttcgtctcgcgtcacgcgatggacggcaaattcctgttcgtcgaccaaagagctactcca
gtattgggctttctacctcaggagctgctgggcaccagcatgtacgaatactatcaccac
gacgacattcctcatctagccgagtctcacaaagccgcgctgcagacctccgagcgcgtt
actacgcagatctacaggtttagaagcaagggcgcgaattttatgaggctgcaatccgag
tggaagtccttccggaatccgtggaccaaagatatcgaatatctaatcgccaagaattcc
gctatcttctgcgacgcgcgtccgggtggaaacaacggatccgaggactcgagcgtgcag
ggcaattacgattacttcgcgcagagtaacggcgcgttagaaaagttgatctcgagtcac
gtggaagtgagcaaaatcggtcggcaaatagcggaagaggtgctggatctgcaaagacgc
ggcgaagactcttcctcgggcagcagtcccggtccagggacggaacctggtttactgaac
atcgagtcacaaatcacaacgacggcgtcaccggaggggctgccggacgtgatacagccg
ggcggcatcggcagcgacaacagcagcagcgatccgacgtcgacgttcaaccatgtagtg
aacaacgtgcagctcaacagcatcgcgaacgaccaaggagcgtcaccagacggggacatg
atggatatgatcggcggcaccgcgattaacgaatcgtcgaatccgattccgtccgatggc
aacgacgaggcagcgatggctgtcatcatgagcctgctggaggcggacgccggtctgggc
ggtcctgtggatttttccggattgccctggccgttgccgtag
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