Linepithema humile (Argentine ant): 105669815
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Entry
105669815 CDS
T04898
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105669815 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105669815 (Vps8)
Membrane trafficking [BR:
lhu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105669815 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Beta-prop_WDR5
WD40_CDC20-Fz
ANAPC4_WD40
zf-RING_Vps41
zf_RING_Vps8_fungal
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
Prok-RING_1
WDR55
Beta-prop_EML_2
Clathrin
TPR_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML
PQQ_2
zf-RING_UBOX
VPS18_RING_C
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105669815
NCBI-ProteinID:
XP_012218373
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Position
3:complement(29232750..29239518)
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AA seq
1299 aa
AA seq
DB search
MAENEFVSDSDECLVTEAINLDIEELDNTEYAIPVVEKLPTLESILMEPDCESMSETDDD
VGIPLGEKLGSSETTSIGSHLSLNSLNKSSKTPQKTSSDVILRHVILKGITSQIVSANER
VNAGLASAVAAGGNMLVIGTSHGLILGFDSSQTLRWCDQEARHQGSVSALCFNHDGSRVL
AGFVRGHIVMLDSSNGKVLRILTDVHPLDTAVLHVKFTDSPKIALCSDSGGSVFELNFTR
VMGVRGCDSRCLFSGSKGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIVVCIRPRMR
VVLSHPLTGASTAPPQLSWQLVVIQTADGSRVIDPVLALARDNVVHFYQVYTEVGSRVKL
SPLRRMTLPYAISNLRWLNPRSLVVLDAQEKLHLLDVRAQDNLETLDLSRIGISYASSHF
KGLSTGGNVSKAMALAGERACYNTVVVFGSQLLLLGTKSLHVICIRTWTERLQHLIMQKR
FPEALALGLSFYQDKGKAVIGLRGSKQRRKQIARDKVCEVLIQYMDELNQCLVDENLDYD
TIVLTCVDYCIQLENLDLLFGKLWDIVFESEGLKTSYLHALEAPLLDGRLQPRLPPLIAQ
QLITLYDQEDKVDSLEAIIVLFNVDCLDIHQVTTICRQRGLWEALIYLQTTALNDFTAPI
HQLVPVLQNLLRDPTAALSRDCIKLGNAILVYTSCCLAGRGFPKDELPEGVPQKAKADIL
RALLSQHSSLANDMERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTTEMGLRHRQRLIDI
LLSIVMPNTPVTPKNTDYITTEQQFMVLVFVANETSESTVTLESSTLNRMVDVLCTDAHV
ELLKDFKTERENAVLGLLHSKKLCNIADNTLLNLANRASFIRVAELLYCAREDWVAVCKC
MILEPSRHHDVWPWLEHLPAASLDQVVSIHVSTLVTINASQFATIIATRLQNKIDVILQS
LNDNLSLEYKLLGALYQVAQYKEEDVSLELTTEHLEKYLALMCNLEPGRVVAHLHGPHGC
RLDEALEIVQRWKCKDAEAVMLEKLGSYQDAFNLLLKEFEDRLEMYRQDKASENETVHAA
VQLAGICRRSAGNLDWMPLVDAIFRSHSENNKEKTNKLSGKLLRLILESLSGTSILSNIL
EQILRNPLAMSGTMGDIRQLLSGVLTQSRYEQTLVETTARLVSLELHKALKKSLRDAGRA
CGNVSTTCPVCRQLLSHCSDYVVVFACGHGYHSTCLGEPKSCYRCLNTKGWAPVATNAHA
APQPPPRKRQLLPPEFLRHKDLTLRLAPPCSIPDLEGIF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgaattcgtatccgatagtgacgaatgtcttgttacagaagctattaat
ttagatatcgaagagttagataatacggaatatgctataccagttgtggaaaaattaccc
accttagaaagtatattgatggaacctgattgtgagtcgatgtcagaaacagatgatgat
gtcggtataccattgggagagaaacttggtagtagtgagaccacaagcattggcagtcac
ttatcattgaattcattaaataagtcttctaaaacccctcagaaaacgtcctcggatgtt
attttaaggcacgtgatactcaaaggaataacatcacaaattgtatcagccaatgaaaga
gtcaatgctggtttagctagtgcagtcgcagctggaggaaatatgttggtaatcggtact
agccatggtctaatattaggttttgactcttcacaaacattaagatggtgcgatcaggaa
gcgagacatcaaggttccgtttctgctctgtgtttcaatcatgatggcagcagggtgttg
gctggttttgtcagaggacacattgtgatgttagatagcagtaatgggaaagttttgaga
attcttactgatgttcacccgcttgacactgctgtactacatgttaagtttacagattca
ccaaaaatagctctctgtagtgatagcggtggttcagtgtttgaattgaatttcactaga
gtaatgggcgtaagaggatgtgatagtagatgtttgtttagcggctccaagggagaagtg
tgcactttggaacccttattgttgaatcatctgccatcacatccgctgaaaaattataca
ttagtagcaatggcaacattatcaaaggtaattgtagtttgcataagaccgcgaatgcgc
gttgtattgagccatccattaactggtgcttcgacagcaccacctcaactgtcctggcag
ttggttgtcatacagacagctgacggatctcgtgtaattgatccagtattggctcttgcg
agagacaatgtggtgcatttttatcaagtatacaccgaggttggttcgcgagtaaagttg
tctcctcttcgaaggatgacgctaccgtatgcaataagcaatttaaggtggctaaatccg
agatctcttgtagtattggatgctcaagagaagttgcatttgttagatgtaagagcgcag
gataatttggaaacgttagatctgagtcgcattggtatttcttatgcctctagtcatttc
aaaggattgtctaccggcggaaatgtttctaaggcaatggcgttagccggtgaacgagca
tgctacaacaccgttgtagtctttggttcgcagctgttgttattaggtacaaagagttta
cacgtgatttgtataagaacatggacggaaagactgcaacacttgatcatgcagaaacgt
ttccccgaagcgttagcgttgggtctttccttttatcaagataaaggcaaagcggttatc
ggccttcgaggttctaagcagcgtcgcaagcaaatagcgcgcgacaaagtttgcgaagtg
ctgattcagtacatggacgaattgaatcagtgtttggtggacgaaaatctagactacgat
acgatagtgctcacatgcgtcgattactgcattcaactagaaaatttagatctgctgttt
gggaagttgtgggacatagtcttcgagtcggaagggctaaaaacgagttacttgcacgca
ctcgaagcccctctgctggacggcagacttcagccaaggttgccgccgttgatcgctcaa
caattgatcacgctttacgatcaagaagacaaagtggattcgctggaggcaatcatagtt
ctgttcaatgtggattgtttagacattcatcaagtaacgacaatttgtcgtcagcgagga
ctctgggaagcactgatttatcttcagaccacagcgctgaacgatttcacggcacccatt
catcagttggtgccggtgctacaaaatttattgcgcgatccaacggccgccctgtcccga
gactgcataaaactcggcaatgctattctcgtgtacaccagttgttgtctcgccggccgc
ggattccccaaggacgagctgcccgagggtgtgccgcagaaagcgaaagctgacatactg
agagccttgctttcccagcattccagcttggcgaatgacatggagaggcaatatccatac
ttgagaacgttattgcaattcgacgcgaagggctttctcgatgttatagccatcgccttt
caggagccagaatttaccaccgaaatgggtcttcggcaccgacaaaggctcatagacatt
ttgttgagcatcgttatgccgaatacgccggtcaccccgaagaataccgattacatcacg
acggagcagcagtttatggttcttgtattcgtggcaaacgagacgtccgaaagcactgtt
acgttggagtctagtacgttgaatagaatggtagatgtattgtgcaccgatgcgcatgta
gaattattgaaagattttaagactgagagagaaaacgccgtgctggggttgttgcattct
aaaaagctgtgcaatattgctgataatactttactgaatttagcgaatagagcgagtttt
ataagagtcgcggagctactttactgcgcgcgagaggactgggtagcagtatgcaaatgt
atgatcttagagccgtccagacatcacgacgtctggccctggctcgagcatctgccggcc
gcttcgttggaccaagttgtatcgattcacgtctcgactctcgtgacgatcaacgccagt
cagttcgccacgatcatcgcgacgcgactgcagaataaaatcgatgtgatactgcaaagt
cttaacgataatttaagcttggaatacaaactgctaggagctttgtatcaagtcgcgcag
tacaaagaggaggacgtttctctggaattaacgactgaacacttagaaaaatatttggcg
ttaatgtgcaatttggagccgggacgtgtggtcgctcatttgcacggaccgcacgggtgc
agactggacgaggcgttggagatcgtccaaaggtggaaatgcaaggacgcggaggcggtg
atgttggagaagctgggcagttaccaggacgcgttcaaccttctgctgaaggagtttgaa
gatcgtctggaaatgtatcgacaggacaaagcctccgagaacgagacggtgcacgccgcc
gtgcagctcgcgggaatttgccgcagatcggcgggaaatctcgactggatgcccctcgtg
gatgccatattccgatcgcattcggaaaacaacaaggaaaagacgaataagttgagcggc
aaattgttgagactaattttagaatctctgagcggtacctcgattctgtcgaacatactg
gagcagatcttgaggaatccattagcgatgagcggaacgatgggcgatatacgacaattg
ttatccggggttctcacacaatcgcgatacgagcaaaccctagtcgagaccaccgcgcga
ttagtgagtttagagcttcacaaggctctgaaaaaatccttgagggatgctggcagagca
tgcggcaacgtttccacaacttgtcccgtgtgccggcaactattgtcgcattgttccgat
tacgtggtggtgttcgcctgcggtcatggatatcactcgacgtgtctgggcgaacctaag
tcgtgttacagatgcttgaacactaaaggatgggcgccagtggctactaatgctcacgca
gcaccccagccaccgcctagaaagagacagcttcttccaccagaattcctacgtcacaaa
gacctcacattaagactggcaccgccctgttccattcctgatcttgagggtatcttttaa
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